Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0885
         (721 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11518-1|CAA77607.1|  509|Homo sapiens histidyl-tRNA synthetase ...   100   5e-21
X05345-1|CAA28956.1|  508|Homo sapiens protein ( Human mRNA for ...   100   5e-21
BC080514-1|AAH80514.1|  509|Homo sapiens histidyl-tRNA synthetas...   100   5e-21
BC011807-1|AAH11807.1|  509|Homo sapiens histidyl-tRNA synthetas...   100   5e-21
AY995220-1|AAX99363.1|  509|Homo sapiens histidyl-tRNA synthetas...   100   5e-21
U18937-1|AAA73974.1|  506|Homo sapiens histidyl-tRNA synthetase ...    94   5e-19
BC014982-1|AAH14982.1|  506|Homo sapiens histidyl-tRNA synthetas...    94   5e-19
BC007680-1|AAH07680.1|  506|Homo sapiens histidyl-tRNA synthetas...    94   5e-19

>Z11518-1|CAA77607.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score =  100 bits (240), Expect = 5e-21
 Identities = 45/65 (69%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG +   P+QM +R  V D II  F+RHGAE IDTPVFELK+ L GKYGEDSKLIYDLKD
Sbjct: 60  KGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKD 119

Query: 668 QGGEI 682
           QGGE+
Sbjct: 120 QGGEL 124



 Score = 57.2 bits (132), Expect = 6e-08
 Identities = 41/112 (36%), Positives = 56/112 (50%)
 Frame = +3

Query: 384 SSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNHSK*QYVIMYWIKLLQFL 563
           +S   ++EEV+KLL LKAQL   D   QKF LKTPKGTRDY+  +       +  +++  
Sbjct: 26  ASAELIEEEVAKLLKLKAQL-GPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCF 84

Query: 564 GDTELSVLIHLFLS*RMCLLGSMVRIQN*YMI*KTKVGKFLSLRYDLTGPLA 719
                 V+       +  L+G            K + G+ LSLRYDLT P A
Sbjct: 85  KRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFA 136


>X05345-1|CAA28956.1|  508|Homo sapiens protein ( Human mRNA for
           histidyl-tRNA synthetase (HRS). ).
          Length = 508

 Score =  100 bits (240), Expect = 5e-21
 Identities = 45/65 (69%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG +   P+QM +R  V D II  F+RHGAE IDTPVFELK+ L GKYGEDSKLIYDLKD
Sbjct: 60  KGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKD 119

Query: 668 QGGEI 682
           QGGE+
Sbjct: 120 QGGEL 124



 Score = 57.2 bits (132), Expect = 6e-08
 Identities = 41/112 (36%), Positives = 56/112 (50%)
 Frame = +3

Query: 384 SSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNHSK*QYVIMYWIKLLQFL 563
           +S   ++EEV+KLL LKAQL   D   QKF LKTPKGTRDY+  +       +  +++  
Sbjct: 26  ASAELIEEEVAKLLKLKAQL-GPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCF 84

Query: 564 GDTELSVLIHLFLS*RMCLLGSMVRIQN*YMI*KTKVGKFLSLRYDLTGPLA 719
                 V+       +  L+G            K + G+ LSLRYDLT P A
Sbjct: 85  KRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFA 136


>BC080514-1|AAH80514.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score =  100 bits (240), Expect = 5e-21
 Identities = 45/65 (69%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG +   P+QM +R  V D II  F+RHGAE IDTPVFELK+ L GKYGEDSKLIYDLKD
Sbjct: 60  KGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKD 119

Query: 668 QGGEI 682
           QGGE+
Sbjct: 120 QGGEL 124



 Score = 57.2 bits (132), Expect = 6e-08
 Identities = 41/112 (36%), Positives = 56/112 (50%)
 Frame = +3

Query: 384 SSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNHSK*QYVIMYWIKLLQFL 563
           +S   ++EEV+KLL LKAQL   D   QKF LKTPKGTRDY+  +       +  +++  
Sbjct: 26  ASAELIEEEVAKLLKLKAQL-GPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCF 84

Query: 564 GDTELSVLIHLFLS*RMCLLGSMVRIQN*YMI*KTKVGKFLSLRYDLTGPLA 719
                 V+       +  L+G            K + G+ LSLRYDLT P A
Sbjct: 85  KRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFA 136


>BC011807-1|AAH11807.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score =  100 bits (240), Expect = 5e-21
 Identities = 45/65 (69%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG +   P+QM +R  V D II  F+RHGAE IDTPVFELK+ L GKYGEDSKLIYDLKD
Sbjct: 60  KGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKD 119

Query: 668 QGGEI 682
           QGGE+
Sbjct: 120 QGGEL 124



 Score = 57.2 bits (132), Expect = 6e-08
 Identities = 41/112 (36%), Positives = 56/112 (50%)
 Frame = +3

Query: 384 SSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNHSK*QYVIMYWIKLLQFL 563
           +S   ++EEV+KLL LKAQL   D   QKF LKTPKGTRDY+  +       +  +++  
Sbjct: 26  ASAELIEEEVAKLLKLKAQL-GPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCF 84

Query: 564 GDTELSVLIHLFLS*RMCLLGSMVRIQN*YMI*KTKVGKFLSLRYDLTGPLA 719
                 V+       +  L+G            K + G+ LSLRYDLT P A
Sbjct: 85  KRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFA 136


>AY995220-1|AAX99363.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score =  100 bits (240), Expect = 5e-21
 Identities = 45/65 (69%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG +   P+QM +R  V D II  F+RHGAE IDTPVFELK+ L GKYGEDSKLIYDLKD
Sbjct: 60  KGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKD 119

Query: 668 QGGEI 682
           QGGE+
Sbjct: 120 QGGEL 124



 Score = 57.2 bits (132), Expect = 6e-08
 Identities = 41/112 (36%), Positives = 56/112 (50%)
 Frame = +3

Query: 384 SSCRKVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNHSK*QYVIMYWIKLLQFL 563
           +S   ++EEV+KLL LKAQL   D   QKF LKTPKGTRDY+  +       +  +++  
Sbjct: 26  ASAELIEEEVAKLLKLKAQL-GPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCF 84

Query: 564 GDTELSVLIHLFLS*RMCLLGSMVRIQN*YMI*KTKVGKFLSLRYDLTGPLA 719
                 V+       +  L+G            K + G+ LSLRYDLT P A
Sbjct: 85  KRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFA 136


>U18937-1|AAA73974.1|  506|Homo sapiens histidyl-tRNA synthetase
           homologue protein.
          Length = 506

 Score = 93.9 bits (223), Expect = 5e-19
 Identities = 40/65 (61%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG + L PQ M +R  +LD +I+ F+RHGA+ +DTP FELK+ LT KYGEDS L+YDLKD
Sbjct: 61  KGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGEDSGLMYDLKD 120

Query: 668 QGGEI 682
           QGGE+
Sbjct: 121 QGGEL 125


>BC014982-1|AAH14982.1|  506|Homo sapiens histidyl-tRNA synthetase
           2, mitochondrial (putative) protein.
          Length = 506

 Score = 93.9 bits (223), Expect = 5e-19
 Identities = 40/65 (61%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG + L PQ M +R  +LD +I+ F+RHGA+ +DTP FELK+ LT KYGEDS L+YDLKD
Sbjct: 61  KGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGEDSGLMYDLKD 120

Query: 668 QGGEI 682
           QGGE+
Sbjct: 121 QGGEL 125


>BC007680-1|AAH07680.1|  506|Homo sapiens histidyl-tRNA synthetase
           2, mitochondrial (putative) protein.
          Length = 506

 Score = 93.9 bits (223), Expect = 5e-19
 Identities = 40/65 (61%), Positives = 51/65 (78%)
 Frame = +2

Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
           KG + L PQ M +R  +LD +I+ F+RHGA+ +DTP FELK+ LT KYGEDS L+YDLKD
Sbjct: 61  KGTRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGEDSGLMYDLKD 120

Query: 668 QGGEI 682
           QGGE+
Sbjct: 121 QGGEL 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,057,289
Number of Sequences: 237096
Number of extensions: 2088622
Number of successful extensions: 3162
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3155
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)