Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0885
(721 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p pro... 112 4e-25
AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA... 112 4e-25
AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB... 94 2e-19
AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orp... 29 4.8
AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC... 29 4.8
AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA... 29 4.8
AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD... 29 4.8
AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB... 29 4.8
AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p pro... 29 6.4
AE013599-2784|AAF57625.2| 1022|Drosophila melanogaster CG15100-P... 29 6.4
>AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p
protein.
Length = 522
Score = 112 bits (270), Expect = 4e-25
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = +2
Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
KG + PQQMT+R VLDKI+ VF+RHG E IDTPVFELK+VLTGKYGEDSKLIYDLKD
Sbjct: 63 KGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGEDSKLIYDLKD 122
Query: 668 QGGEI 682
QGGEI
Sbjct: 123 QGGEI 127
Score = 56.8 bits (131), Expect = 3e-08
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +3
Query: 387 SCRKVKEEVSKLLALKAQLVTEDAGP--QKFTLKTPKGTRDYNHSK*QYVIMYWIKLLQF 560
S K+ EEV++LLALKA L DA P QKFTLKTPKGTRDY + K++Q
Sbjct: 28 SKEKIDEEVARLLALKATL-GGDAAPTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQV 86
Query: 561 LGDTELSVLIHLFLS*RMCLLGSMVRIQN*YMI*KTKVGKFLSLRYDLTGPLA 719
+ + L G K + G+ LS+RYDLT PLA
Sbjct: 87 FKRHGGEAIDTPVFELKEVLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLA 139
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +3
Query: 129 MADSQEDLLLKIQEQGDLVRKLKAAKDSNER 221
M+D++E +L +I+ QGDLVR+LKAAK+S E+
Sbjct: 1 MSDTREQILEQIKVQGDLVRQLKAAKESKEK 31
>AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA,
isoform A protein.
Length = 522
Score = 112 bits (270), Expect = 4e-25
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = +2
Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD 667
KG + PQQMT+R VLDKI+ VF+RHG E IDTPVFELK+VLTGKYGEDSKLIYDLKD
Sbjct: 63 KGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKEVLTGKYGEDSKLIYDLKD 122
Query: 668 QGGEI 682
QGGEI
Sbjct: 123 QGGEI 127
Score = 56.8 bits (131), Expect = 3e-08
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +3
Query: 387 SCRKVKEEVSKLLALKAQLVTEDAGP--QKFTLKTPKGTRDYNHSK*QYVIMYWIKLLQF 560
S K+ EEV++LLALKA L DA P QKFTLKTPKGTRDY + K++Q
Sbjct: 28 SKEKIDEEVARLLALKATL-GGDAAPTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQV 86
Query: 561 LGDTELSVLIHLFLS*RMCLLGSMVRIQN*YMI*KTKVGKFLSLRYDLTGPLA 719
+ + L G K + G+ LS+RYDLT PLA
Sbjct: 87 FKRHGGEAIDTPVFELKEVLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLA 139
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +3
Query: 129 MADSQEDLLLKIQEQGDLVRKLKAAKDSNER 221
M+D++E +L +I+ QGDLVR+LKAAK+S E+
Sbjct: 1 MSDTREQILEQIKVQGDLVRQLKAAKESKEK 31
>AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB,
isoform B protein.
Length = 563
Score = 93.9 bits (223), Expect = 2e-19
Identities = 51/84 (60%), Positives = 56/84 (66%), Gaps = 19/84 (22%)
Frame = +2
Query: 488 KGNKRLQPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELK------------------- 610
KG + PQQMT+R VLDKI+ VF+RHG E IDTPVFELK
Sbjct: 85 KGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKVSSPGSHWSGMILFKTMRI 144
Query: 611 DVLTGKYGEDSKLIYDLKDQGGEI 682
+VLTGKYGEDSKLIYDLKDQGGEI
Sbjct: 145 EVLTGKYGEDSKLIYDLKDQGGEI 168
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
Frame = +3
Query: 396 KVKEEVSKLLALKAQLVTEDAGP--QKFTLKTPKGTRDY 506
++ EEV++LLALKA L DA P QKFTLKTPKGTRDY
Sbjct: 53 QIDEEVARLLALKATL-GGDAAPTNQKFTLKTPKGTRDY 90
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +3
Query: 129 MADSQEDLLLKIQEQGDLVRKLKAAKDSNERY 224
M+D++E +L +I+ QGDLVR+LKAAK+S E++
Sbjct: 1 MSDTREQILEQIKVQGDLVRQLKAAKESKEKH 32
>AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orphan
neurotransmittertransporter protein.
Length = 1035
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 444 VTEDAGPQKFTLKTPKGTRDYNHS 515
V +D G + FTL+ +GTRDY HS
Sbjct: 732 VCQDTGRRDFTLRR-RGTRDYTHS 754
>AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC,
isoform C protein.
Length = 809
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 444 VTEDAGPQKFTLKTPKGTRDYNHS 515
V +D G + FTL+ +GTRDY HS
Sbjct: 565 VCQDTGRRDFTLRR-RGTRDYTHS 587
>AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA,
isoform A protein.
Length = 769
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 444 VTEDAGPQKFTLKTPKGTRDYNHS 515
V +D G + FTL+ +GTRDY HS
Sbjct: 525 VCQDTGRRDFTLRR-RGTRDYTHS 547
>AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD,
isoform D protein.
Length = 976
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 444 VTEDAGPQKFTLKTPKGTRDYNHS 515
V +D G + FTL+ +GTRDY HS
Sbjct: 732 VCQDTGRRDFTLRR-RGTRDYTHS 754
>AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB,
isoform B protein.
Length = 976
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 444 VTEDAGPQKFTLKTPKGTRDYNHS 515
V +D G + FTL+ +GTRDY HS
Sbjct: 732 VCQDTGRRDFTLRR-RGTRDYTHS 754
>AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p
protein.
Length = 1012
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 132 ADSQEDLLLKIQEQGDLVRKLKAA 203
+ S +DL IQEQGD VRKLK +
Sbjct: 879 SQSVQDLEKAIQEQGDKVRKLKGS 902
>AE013599-2784|AAF57625.2| 1022|Drosophila melanogaster CG15100-PA
protein.
Length = 1022
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 132 ADSQEDLLLKIQEQGDLVRKLKAA 203
+ S +DL IQEQGD VRKLK +
Sbjct: 889 SQSVQDLEKAIQEQGDKVRKLKGS 912
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,693,033
Number of Sequences: 53049
Number of extensions: 626335
Number of successful extensions: 1181
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -