Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0880
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.5  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 337 VDSFRAQWYLQPAKYDKDNLFYIYNREYSKAL 432
           +D+ R  W    AKYDKD    +Y ++Y   +
Sbjct: 94  IDNKRDWWNELEAKYDKDG---VYRQKYKDVI 122


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +2

Query: 50  FPVEFRLIFAENAIKLMYKRDGLALTLSNDVH 145
           FP+++ L+F+E  + L++K   + + +S  V+
Sbjct: 701 FPIDYSLVFSETKL-LLFKITSVMIAVSGLVY 731


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 89  IKLMYKRDGLALTLSNDVHGNDGRLAFGDGKDKTSPKV 202
           IKL+ +++     LS+D    + +   G+ KDK  PK+
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 325 GVNSVDSFRA 354
           GVNS DSF+A
Sbjct: 26  GVNSADSFKA 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,742
Number of Sequences: 336
Number of extensions: 3058
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)