Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0880
         (629 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701...    34   0.11 
01_01_0866 - 6765761-6766413,6766805-6766906,6767693-6768965           28   5.3  
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469...    28   7.0  
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667...    28   7.0  
02_04_0131 - 20046033-20046505,20047140-20047233,20047343-200474...    28   7.0  
07_01_0622 - 4625246-4627759                                           27   9.3  

>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
            30670186-30670281,30670679-30670828,30670956-30671100,
            30671178-30671251,30671325-30671445,30671697-30671821,
            30671898-30672047,30672249-30672324,30672496-30672557,
            30672597-30672839,30673354-30673683,30673776-30673932,
            30674008-30674139,30674219-30674277,30674734-30674798,
            30674878-30675094,30675413-30675499,30675655-30675750,
            30675938-30676003,30676096-30676287,30676380-30676532,
            30676812-30677052,30677322-30677515,30678212-30678348,
            30678474-30678480,30678708-30678830,30679370-30679427,
            30680018-30680090,30680493-30681765
          Length = 1714

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 18/67 (26%), Positives = 35/67 (52%)
 Frame = -2

Query: 217  NELPADFRACFVLTVAEGKSAIVAVNIITQRQSETVALVHKLNGVFGEDKSELNWETITD 38
            NEL ++    F+L V     +I  +NI+ QR S   + V+  N + G+     +++ I +
Sbjct: 895  NELKSEELESFLLVVDGANFSIPELNILMQRYSGACSWVNHANNIVGKLLERNDYDNIVE 954

Query: 37   DVLGALE 17
            ++ G L+
Sbjct: 955  ELTGILK 961


>01_01_0866 - 6765761-6766413,6766805-6766906,6767693-6768965
          Length = 675

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 100 HKLNGVFGEDKSELNWETITDDVLGA 23
           ++L G  GED++ LNWET     LGA
Sbjct: 455 NELIGKRGEDRTPLNWETRVRIALGA 480


>09_04_0202 -
           15544498-15545037,15546043-15546449,15546874-15546977,
           15547580-15547788,15548092-15549428,15551680-15551941
          Length = 952

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 206 WKFIALWENNKVYFKI*TLSVTNIWYWESVLTRTATTWPSEST 334
           WK I  W       +   L  +   Y +SVL      WP +ST
Sbjct: 403 WKDIGFWNEGNGILRQLNLGKSTTKYADSVLDLNPVIWPGKST 445


>07_03_1566 +
           27766336-27766393,27766480-27766609,27766728-27766797,
           27767134-27767196,27767741-27767815,27768035-27768154,
           27768508-27768549,27768651-27768725,27768909-27769055,
           27769165-27769302,27769448-27769562,27769658-27769746,
           27770062-27770184
          Length = 414

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +1

Query: 259 TERNQYLVLGVGTNPNGDHMAFGVNSVDSFRAQWYLQPAKYDKDNLFYIYNR-EYSKALT 435
           TE+ + L      NP    +A   + VD+ R   Y+ PAKY    L ++ N+   S  + 
Sbjct: 170 TEKVKKLRRACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMV 229

Query: 436 LSRTLETS 459
             RT E++
Sbjct: 230 FVRTCEST 237


>02_04_0131 -
           20046033-20046505,20047140-20047233,20047343-20047434,
           20047560-20047611,20047721-20047878,20048190-20048280,
           20048397-20049455
          Length = 672

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 525 HPKRNVGTS-DHSTIVSPGHAVTRGFK 448
           HP R + TS DH   VS GH +T+ F+
Sbjct: 489 HPSRMIITSKDHKIRVSEGHKITQKFQ 515


>07_01_0622 - 4625246-4627759
          Length = 837

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 500 PITLPLYPQAMRLPEVSSVLDSVKALLY 417
           P+TLPLYPQ+M   + S+  D  +A L+
Sbjct: 398 PVTLPLYPQSME--DASTQSDCEEACLH 423


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,610,213
Number of Sequences: 37544
Number of extensions: 332237
Number of successful extensions: 941
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)