Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0878
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69635-2|CAA93462.1| 555|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z69635-1|CAA93459.1| 515|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z69634-7|CAA93453.2| 248|Caenorhabditis elegans Hypothetical pr... 77 9e-15
AF099919-2|AAC68794.1| 160|Caenorhabditis elegans Hypothetical ... 32 0.34
Z81508-4|CAB04139.1| 371|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical ... 29 4.2
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 7.4
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 9.8
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 9.8
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 9.8
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z69635-2|CAA93462.1| 555|Caenorhabditis elegans Hypothetical
protein F19B6.1b protein.
Length = 555
Score = 88.2 bits (209), Expect = 5e-18
Identities = 38/82 (46%), Positives = 58/82 (70%)
Frame = +1
Query: 7 LKDILAGKKVEIPEYDYISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDT 186
LK + GK V++P YD+ ++S + +Y ADV++ EGIL F+ +++L MK+FVDT
Sbjct: 175 LKRLREGKSVDVPVYDFNTHSRDPNSKMMYGADVLIFEGILAFHDERIKNLMDMKVFVDT 234
Query: 187 DSDTRLARRVPRDIMERGRDLE 252
D D RLARR+ RD+ +RGRD++
Sbjct: 235 DGDLRLARRIVRDVTDRGRDID 256
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 246 LGAVLNQYMNFVKPAFEEFCLPTKKFADVIIPRGADNLVAIDLIVQHI 389
+ ++ QY FVKPAF+++ P AD+I+PRG +N VAID+IVQ++
Sbjct: 255 IDGIMEQYFTFVKPAFDKYIAPCMDSADLIVPRGGENDVAIDMIVQNV 302
>Z69635-1|CAA93459.1| 515|Caenorhabditis elegans Hypothetical
protein F19B6.1a protein.
Length = 515
Score = 88.2 bits (209), Expect = 5e-18
Identities = 38/82 (46%), Positives = 58/82 (70%)
Frame = +1
Query: 7 LKDILAGKKVEIPEYDYISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDT 186
LK + GK V++P YD+ ++S + +Y ADV++ EGIL F+ +++L MK+FVDT
Sbjct: 135 LKRLREGKSVDVPVYDFNTHSRDPNSKMMYGADVLIFEGILAFHDERIKNLMDMKVFVDT 194
Query: 187 DSDTRLARRVPRDIMERGRDLE 252
D D RLARR+ RD+ +RGRD++
Sbjct: 195 DGDLRLARRIVRDVTDRGRDID 216
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 246 LGAVLNQYMNFVKPAFEEFCLPTKKFADVIIPRGADNLVAIDLIVQHI 389
+ ++ QY FVKPAF+++ P AD+I+PRG +N VAID+IVQ++
Sbjct: 215 IDGIMEQYFTFVKPAFDKYIAPCMDSADLIVPRGGENDVAIDMIVQNV 262
>Z69634-7|CAA93453.2| 248|Caenorhabditis elegans Hypothetical
protein B0001.4 protein.
Length = 248
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = +3
Query: 252 AVLNQYMNFVKPAFEEFCLPTKKFADVIIPRGADNLVAIDLIVQHISDYLKK 407
+++ QY FVKPAFEEFC PTKK+ADVIIPRGADN VA DLI +++ + +K
Sbjct: 168 SIIRQYTEFVKPAFEEFCRPTKKYADVIIPRGADNHVATDLIAKNLQETFRK 219
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/80 (45%), Positives = 55/80 (68%)
Frame = +1
Query: 4 TLKDILAGKKVEIPEYDYISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVD 183
TL++++ GK VEIP+YD I++S+ N T T+ PA V++IEGIL+ Y VR L KLFV+
Sbjct: 86 TLQNMIDGKTVEIPKYDMITSSM-NGTVTVEPAKVIIIEGILLLYDERVRKLLSTKLFVE 144
Query: 184 TDSDTRLARRVPRDIMERGR 243
++++RL R+ I + R
Sbjct: 145 KNAESRLRNRLATYIRDYHR 164
>AF099919-2|AAC68794.1| 160|Caenorhabditis elegans Hypothetical
protein F40G9.7 protein.
Length = 160
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -2
Query: 301 NSSNAGFTKFIYWLSTAPSLGHVPLYPSEL--VSQVWYLNQYQQTVSCERDPSLRES 137
NSS F ++Y+ +T LG PL P + V + LN YQ T++ R+ + E+
Sbjct: 92 NSSFGLFGHYLYFDATLTGLGSPPLDPLNVGFVVHTFVLNAYQHTLTTAREKNCSEN 148
>Z81508-4|CAB04139.1| 371|Caenorhabditis elegans Hypothetical
protein F20E11.6 protein.
Length = 371
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 119 SISTTSAGYSVFVRLLIEFEM*SYSGISTFFPANMSFN 6
S+S++ GY VF+ LLI + SYS STFF F+
Sbjct: 130 SLSSSVFGYIVFILLLILHSLISYSFYSTFFLREWPFS 167
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical
protein F46C3.3 protein.
Length = 2557
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 492 VVFRSILRN*AFFMTLLYIELYSWITAKLNSYSKCTSNTFIVNFI*H 632
+ + L N F ++Y EL+ W+ ++ KC+ +T +++ + H
Sbjct: 312 IELNAALDNRDSFAMMIYEELFKWVLNRIGLQLKCSLHTGVISILDH 358
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 43 PEYDYISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDTDSDTRLARRVP 219
P+YDY++N++ +++ PA ++ I + + FH + ++ T +R+P
Sbjct: 169 PDYDYVNNALIGFSDSKSPAAIIAQSLISLGVYMSPLIAFHYRRKINKILSTNTGQRIP 227
>AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical
protein Y53G8AR.5 protein.
Length = 287
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +3
Query: 210 TSSEGYNGTWPRLGAVLNQYMNFVKPAFEEFCLPTKKFADVIIPRGADNLVAIDLIVQHI 389
T SEGY P + L+ +P F E ++ II + +D + I I QH
Sbjct: 52 TVSEGYPAVSPTV--TLSNPRGIGEPEFREL----QRQIQEIIEQNSDEMPIICQIFQHC 105
Query: 390 SDYLKKN 410
SD+L +N
Sbjct: 106 SDFLTEN 112
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 268 YWLSTAPSLGHVPLYPSELVSQVWYL-NQYQQTV 170
Y LS A SLG +P+ L +++WY N Y V
Sbjct: 544 YKLSLALSLGQIPIKIKSLGNKIWYYKNDYSGDV 577
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical
protein C02G6.1 protein.
Length = 980
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 58 ISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDTDSDTRLARRVPRDIME 234
I + + ++ L D V +E + F E+ FHM+LFV +S + A ++ +++M+
Sbjct: 645 IVDKVWSKEQLLAVCDSVTLENVQGFA-REMLQAFHMELFVHGNSTEKEAIQLSKELMD 702
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 58 ISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDTDSDTRLARRVPRDIME 234
I + + ++ L D V +E + F E+ FHM+LFV +S + A ++ +++M+
Sbjct: 731 IVDKVWSKEQLLAVCDSVTLEDVQGFA-KEMLQAFHMELFVHGNSTEKEAIQLSKELMD 788
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 58 ISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDTDSDTRLARRVPRDIME 234
I + + ++ L D V +E + F E+ FHM+LFV +S + A ++ +++M+
Sbjct: 672 IVDKVWSKEQLLAVCDSVTLEDVQGFA-KEMLQAFHMELFVHGNSTEKEAIQLSKELMD 729
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 58 ISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDTDSDTRLARRVPRDIME 234
I + + ++ L D V +E + F E+ FHM+LFV +S + A ++ +++M+
Sbjct: 731 IVDKVWSKEQLLAVCDSVTLEDVQGFA-KEMLQAFHMELFVHGNSTEKEAIQLSKELMD 788
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 58 ISNSISNRTNTLYPADVVLIEGILVFYFPEVRDLFHMKLFVDTDSDTRLARRVPRDIME 234
I + + ++ L D V +E + F E+ FHM+LFV +S + A ++ +++M+
Sbjct: 715 IVDKVWSKEQLLAVCDSVTLEDVQGFA-KEMLQAFHMELFVHGNSTEKEAIQLSKELMD 772
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,862,546
Number of Sequences: 27780
Number of extensions: 306111
Number of successful extensions: 810
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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