Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0876
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    29   0.030
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   6.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.0  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 29.5 bits (63), Expect = 0.030
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
 Frame = +3

Query: 531 CESIGEPKITLSS-----DLSSALEKDSGNNSLEPDMEPLKTLRQAAICKIAEACYISVV 695
           C     P  TL S     DLSS   +D G+ SL  D+EPL +L   + C    A Y S  
Sbjct: 18  CNWSSGPNATLQSSACTDDLSSCWSEDMGSFSLPLDLEPLPSLFPFSPCN-NTANYKSEA 76

Query: 696 HNIRASAK 719
            N  +S K
Sbjct: 77  QNQPSSYK 84


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 367 HIVGDIVIELTEQSKSFTGLYTADTNVIGA 456
           H+V +I   L E +  F    TA T VIGA
Sbjct: 270 HLVEEIERSLREGAAPFMVSATAGTTVIGA 299


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 419 VKDFDCSVNSI 387
           + DFDC +NSI
Sbjct: 372 ISDFDCDINSI 382


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 558 TLSSDLSSALEKDSGNNSLEPDMEPLKTLRQAAICKIAEACYISV 692
           T S +  S+ E DSG +S +PD E   +   + I   +E  Y SV
Sbjct: 125 TASRETKSS-ESDSGASSADPDDELRSSSAFSYIKPSSERDYFSV 168


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 513 QPETFTCESIGEPKITLS 566
           +P TFTC   G P  T+S
Sbjct: 343 RPATFTCNFEGNPIKTIS 360


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 419 QDFTRPIQMSLELSGM 466
           QD  R ++MSLE SG+
Sbjct: 144 QDHLRRLEMSLEKSGL 159


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/40 (20%), Positives = 19/40 (47%)
 Frame = -3

Query: 320 IWKSDICWFFKPVMFKFLKRITFPHRWEQLHPMTSQLVDR 201
           IWK+ + W+   V  K ++ +     +   + + +  +DR
Sbjct: 83  IWKTTVAWYAGNVACKVIRFLQVVVTYASTYVLVALSIDR 122


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 108 ANLVTCNALAVRQSSFWRKPVKGYHNTTYG 197
           + ++   ++ +  +SF+R    GY+ TT+G
Sbjct: 234 SKIIISGSIFMTTTSFYRILNSGYNLTTFG 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,106
Number of Sequences: 336
Number of extensions: 3722
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)