Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0875
(262 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 31 0.17
07_03_0846 - 21983581-21986055 29 0.39
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 28 1.2
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 27 1.6
08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164... 27 2.1
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 27 2.1
01_05_0118 + 18335065-18335553 27 2.1
11_07_0014 + 27379941-27379974,27381975-27382033,27382561-273827... 27 2.7
09_02_0267 - 6485428-6485895,6488255-6488303,6488466-6488469,648... 27 2.7
06_01_0655 + 4742267-4742531,4743313-4744136 27 2.7
01_01_0785 - 6076089-6077615 26 3.6
09_06_0342 + 22410674-22411060,22412219-22412299,22412376-224125... 25 6.3
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 25 6.3
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 25 6.3
03_05_0751 - 27389910-27392105 25 6.3
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 25 6.3
02_01_0298 + 1998278-1998655,1998836-1999111,1999203-1999271,199... 25 6.3
01_01_0098 + 744582-745380,746107-746130,746500-747569 25 6.3
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 25 8.4
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 25 8.4
05_05_0123 - 22553400-22554509 25 8.4
01_06_1730 + 39494738-39495853 25 8.4
01_01_1235 - 10017728-10017766,10018891-10019352 25 8.4
01_01_0117 + 864966-865686,866860-866883,867006-868063 25 8.4
>06_03_1055 -
27234824-27234838,27236087-27236125,27236322-27237388,
27237422-27237630,27237650-27238053
Length = 577
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -2
Query: 231 ASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGS 97
A+ A +GK + E E S+QCD T + +S RE ++R+P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473
>07_03_0846 - 21983581-21986055
Length = 824
Score = 29.5 bits (63), Expect = 0.39
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 89 DLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASA 238
DL+D G +R +C+T S PD S VS+ LPD+A+ A A
Sbjct: 326 DLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -2
Query: 240 KAEASLAESGKDMLTVEP-RESGGSKQCDFTSRVSHSKRETR-RRSPFGSRRSMLSVFFL 67
K+ AS A G D P R GG K+ S + SKR + R + F +L L
Sbjct: 4 KSSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERNAAFHVPPHLLHSGPL 63
Query: 66 TRASR 52
TRA+R
Sbjct: 64 TRAAR 68
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 212 ARICSLWSPESREALNNVTLLVAFRIQNARRDVEA 108
AR C W PESR ++ V ++A ++R+ A
Sbjct: 449 ARECLQWEPESRPTMSEVVQILATIAPSSRKHAAA 483
>08_02_1081 +
24215323-24215335,24215450-24215572,24216241-24216489,
24218517-24218720,24218864-24218993,24219610-24219679,
24219766-24219900,24219996-24220209,24220314-24220455,
24220630-24220851,24220997-24221195
Length = 566
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 180 SGGSKQCDFTSRVSHSKRETRRRSPFGSRRSML 82
S G+ Q T R HS E RRRS R +L
Sbjct: 212 SAGTDQMPNTPRSKHSATEQRRRSKINDRFQLL 244
>01_07_0124 +
41212728-41212922,41215156-41215210,41215336-41217128,
41217363-41217521,41217883-41218054,41218173-41218471,
41219060-41219368
Length = 993
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +2
Query: 71 KKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAF 250
KKT ++ + P+ R + + + +V S C D G+ ++ + R+ASA++AF
Sbjct: 566 KKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTDAKAKRVASAIDAF 625
>01_05_0118 + 18335065-18335553
Length = 162
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 222 AESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSR 94
A+ G + V P +GG+++ + ++ K T RR+ FG+R
Sbjct: 18 AQDGHRLPDVAPA-AGGTREPEHARLIARRKESTYRRTAFGNR 59
>11_07_0014 +
27379941-27379974,27381975-27382033,27382561-27382782,
27383727-27383810,27385054-27385131,27385716-27385832,
27385956-27386019,27386399-27386402,27386565-27386613,
27388973-27389440
Length = 392
Score = 26.6 bits (56), Expect = 2.7
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 56 DARVKKKTDSIDLRDPNGLRRRVSRFE-CETRLVKSHCLEPPDSRGSTVSISLPDSARLA 232
D KKK S + N R+RV+ FE +R + L S +T +LPD+ L
Sbjct: 253 DGEPKKKPTSTPSQKRNNKRKRVTAFERLWSRAGELRILRAMASHTNTHRSTLPDTCDLF 312
Query: 233 SAL 241
+ L
Sbjct: 313 ATL 315
>09_02_0267 -
6485428-6485895,6488255-6488303,6488466-6488469,
6488849-6488912,6489036-6489152,6489737-6489814,
6491058-6491141,6492086-6492307,6492835-6492893,
6494894-6494927
Length = 392
Score = 26.6 bits (56), Expect = 2.7
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 56 DARVKKKTDSIDLRDPNGLRRRVSRFE-CETRLVKSHCLEPPDSRGSTVSISLPDSARLA 232
D KKK S + N R+RV+ FE +R + L S +T +LPD+ L
Sbjct: 253 DGEPKKKPTSTPSQKRNNKRKRVTAFERLWSRAGELRILRAMASHTNTHRSTLPDTCDLF 312
Query: 233 SAL 241
+ L
Sbjct: 313 ATL 315
>06_01_0655 + 4742267-4742531,4743313-4744136
Length = 362
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 89 DLRDPN-GLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLAS 235
++RDP G+R + F +++ E RG ++ PD A +AS
Sbjct: 129 EIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFPDGAPVAS 178
>01_01_0785 - 6076089-6077615
Length = 508
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 212 ARICSLWSPESREALNNVTLLVAFRIQNARRDVEAH 105
A + SLWSPES E + + Q R+V H
Sbjct: 336 AEVASLWSPESGEPITAEKIAEMKYTQAVAREVVRH 371
>09_06_0342 +
22410674-22411060,22412219-22412299,22412376-22412579,
22412765-22412959,22413064-22413228,22413501-22413761,
22413908-22414126,22414285-22414504,22414591-22414613,
22414728-22414766
Length = 597
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 122 VSRFECETRLVKSHCLEPPDSRGSTVSISLPDSA 223
+ F+C R ++ ++RG T+ PDSA
Sbjct: 340 IGEFQCYDRYLQKSLRRAAEARGHTIWARAPDSA 373
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 240 KAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 109
++ ASL SGKD+ T+ G+ R S RE R RS
Sbjct: 2091 ESHASLHTSGKDITTMPSEVDSGAPSKAPGRRRKGSAREPRTRS 2134
>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
Length = 711
Score = 25.4 bits (53), Expect = 6.3
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 17 RHRTELY-PDLRSRDARVKKKTDSIDLR-DPNG-LRRRVSRFECETRLVKSHCLEPPDSR 187
R R E+ DLR R R + S+ + + NG RRR R+ +SH SR
Sbjct: 383 RDRVEMDGSDLRHRLRRRRINESSLAISPERNGEQRRRDERYRERAHGHRSHRDHHQSSR 442
Query: 188 GSTVSISLPDSARL 229
GST+S L +L
Sbjct: 443 GSTLSSRLQGRIKL 456
>03_05_0751 - 27389910-27392105
Length = 731
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 258 ISLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTS 148
ISLN SKAE + + ++ E SKQ F S
Sbjct: 259 ISLNVSKAEVLKVKKNRQSEDLDVMEGRNSKQSAFCS 295
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 131 FECETRLVKSHCLE---PPDSRGSTVSISLPDSARLASALE 244
F + RL K HCLE P+S+ S+V +++ + A+ E
Sbjct: 524 FMWDMRLSKKHCLELIGHPESQFSSVKLNIDNRTVFAATKE 564
>02_01_0298 +
1998278-1998655,1998836-1999111,1999203-1999271,
1999881-2000073,2000161-2000555
Length = 436
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 237 AEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPF 103
A A A +GK R+ GSK+ + H KR TR + F
Sbjct: 35 AVACRAAAGKGTSKARARDKDGSKRQQRRALEEHLKRRTRSGAAF 79
>01_01_0098 + 744582-745380,746107-746130,746500-747569
Length = 630
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 203 CSLWSPESREALNNVTLLVAFRIQN 129
C W+P +R ++ V ++ R+QN
Sbjct: 589 CIQWNPRNRPSMTKVVNMITGRLQN 613
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 77 TDSIDLRDPNGLRRRV--SRFECETRLVKSHCLEPPDSRGSTVSI-SLPDSARL 229
TDS+ + PNG+ R + S E T +V + P R +S+ SL RL
Sbjct: 118 TDSLSVSTPNGVARSLTPSPLESPTWMVGHNDASPTSKRNERLSLDSLGCDTRL 171
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 25.0 bits (52), Expect = 8.4
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 127 RDATSKPIWIAEIDAIG 77
++A KP W+ ++DA+G
Sbjct: 402 KEAEGKPDWVKDLDAVG 418
>05_05_0123 - 22553400-22554509
Length = 369
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = -2
Query: 261 GISLNASKAEASLAESGKDMLTVEPRES----GGSKQCDFTSRVSHSKRETRRRSPFGSR 94
G+ L ASKA + K + + + G +++ S H RR+PFG
Sbjct: 166 GLKLKASKAYIKTIFAAKPASSGDDDDKDAILGATRETKELSHGGHHHHRAWRRNPFGQM 225
Query: 93 RS 88
RS
Sbjct: 226 RS 227
>01_06_1730 + 39494738-39495853
Length = 371
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 128 ARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDI 33
A + V +D GD+ ++F+S V G G D+
Sbjct: 263 ANQPVSVAIDAGDQSFQFYSDGVFAGDCGTDL 294
>01_01_1235 - 10017728-10017766,10018891-10019352
Length = 166
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 153 TSRVSHSKRETRRRSPFGSRRS 88
TS + SK + RSPF SRRS
Sbjct: 119 TSPTAASKAASSSRSPFASRRS 140
>01_01_0117 + 864966-865686,866860-866883,867006-868063
Length = 600
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 203 CSLWSPESREALNNVTLLVAFRIQN 129
C W+P++R ++ V ++ R+QN
Sbjct: 559 CIQWNPKNRPSMTKVVNMLTGRLQN 583
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,297,077
Number of Sequences: 37544
Number of extensions: 131021
Number of successful extensions: 449
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 14,793,348
effective HSP length: 65
effective length of database: 12,352,988
effective search space used: 259412748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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