Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0875
(262 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.45
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 27 1.8
SB_21597| Best HMM Match : ig (HMM E-Value=2.9e-14) 27 3.2
SB_41008| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09) 26 5.5
SB_12162| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_48009| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 26 5.5
SB_19015| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 26 5.5
SB_9526| Best HMM Match : Big_1 (HMM E-Value=1.8) 26 5.5
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 25 7.3
SB_44587| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_40863| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 25 7.3
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 25 7.3
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 25 7.3
SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_57377| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_12826| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_3173| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18) 25 9.7
SB_47075| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_24049| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_4725| Best HMM Match : Mt_ATP-synt_D (HMM E-Value=1.4) 25 9.7
SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074) 25 9.7
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25) 25 9.7
SB_1694| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 29.5 bits (63), Expect = 0.45
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 80 DSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDS 184
DS ++DP G+RR++ F E R V L+ D+
Sbjct: 101 DSPPIKDPPGVRRKIEEFTIEQRAVNKRRLDLLDT 135
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 195 VEPRESGGSK-QCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRS 40
+E +S G + +CD TSR+S R F ++R++ F + S RS
Sbjct: 2037 IEDLDSFGQRDRCDGTSRISRQSRSRIETDVFPTKRNLSHSFKDVKTSESERS 2089
>SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 27.5 bits (58), Expect = 1.8
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = -2
Query: 255 SLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRR-SPFGSRRSMLS 79
SL S SL S + L V S T R +T RR SP+ S LS
Sbjct: 512 SLRTSAERPSLRTSAERPLPVRTSTDTSSSFRSSTERPFSFHADTERRESPWTSTERTLS 571
Query: 78 VFFLTRASRLRRSGYNSVRCRGSE 7
+ + RL GY + R +E
Sbjct: 572 LRTSSEFDRLSPKGYETPSMRPTE 595
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +2
Query: 101 PNGLRRRVSRFECET----RLVKSHCLEPPDSRGSTVSISLPDSARLASALEAF 250
PN LR R S F L CL PP++ G I L D + LA A+
Sbjct: 1246 PNDLRGRWSDFFSNLFQLEHLELDRCLRPPNAEGKPWLIILSDGSDLAYGFAAY 1299
>SB_21597| Best HMM Match : ig (HMM E-Value=2.9e-14)
Length = 1931
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 32 LYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPP 178
L D+R++ A V D++ RD GL R + + V+++C P
Sbjct: 1349 LIVDIRAKFATVLGSVDNLGARDAQGLSRDILMLLRLAQDVQTYCASAP 1397
>SB_41008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 104 NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSAR 226
NG+R + + C + C P +S +SIS+ R
Sbjct: 39 NGIRHEMHSYSCPPKQKLHICTRPVESSAKYISISVTSRGR 79
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 26 TELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSH 163
+++ P L S + R+ +K RDP+ LRR + + V SH
Sbjct: 1827 SQVLPWLSSAEERLARKMAQPIGRDPSTLRREIDELKAFQAEVNSH 1872
>SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09)
Length = 275
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 195 VEPRESGGSKQCDFTSRVSHSKRETRRRSPFG 100
+EP + S C+F+SR+ T+RR PFG
Sbjct: 1 MEPAATPPSSSCEFSSRLL-----TKRRCPFG 27
>SB_12162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 240 KAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRR 115
K + + AE+G D+L ++Q TS++ ++++TRR
Sbjct: 221 KMDTANAENGVDVLKTSASMVFNNEQFSATSQIKGTEKDTRR 262
>SB_48009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 25.8 bits (54), Expect = 5.5
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 47 RSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSAR 226
R D + KT +++ R+ L R + RFE + V + + ++ GS SLP + +
Sbjct: 48 RGNDQAPRGKTVAMEQRELE-LERMIDRFEKQQSEVMNAAQKFEEATGSLPDPSLPVANQ 106
Query: 227 LASALEAFR 253
L A+ R
Sbjct: 107 LELAVRKIR 115
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 25.8 bits (54), Expect = 5.5
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -3
Query: 245 PLRPKPA*PNPARICSLWSPESREALNNVTLLVAF--RIQNARRDVEAHLDRGDRCYRFF 72
PL P A P +CSL + R V++LVA R+ D + R D C R F
Sbjct: 3145 PLNPTHASPT---MCSL-THRVRAHHQPVSVLVASEGRVVTGSHDRTLKVFRTDHCVRIF 3200
Query: 71 S*HVHHGSEGPDITQFDVGARN 6
+ H H IT+ V + N
Sbjct: 3201 TLHGHRDG----ITELKVDSNN 3218
>SB_19015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 6 IPSPDIELSYIRTFGAVMHVLRKKPIASISAIQMGF 113
IP+ I +SY R +G H LR+ IAS+ + GF
Sbjct: 193 IPAIIICISYGRIYGVAKHQLRQ--IASLDRTRRGF 226
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 240 KAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRR 115
K + + AE+G D+L ++Q TS++ ++++TRR
Sbjct: 1030 KMDTANAENGVDVLKTSASMVFNNEQFSATSQIKGTEKDTRR 1071
>SB_9526| Best HMM Match : Big_1 (HMM E-Value=1.8)
Length = 649
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 240 KAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRR 115
K + + AE+G D+L ++Q TS++ ++++TRR
Sbjct: 249 KMDTANAENGVDVLKTSASMVFNNEQFSATSQIKGTEKDTRR 290
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 252 LNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 133
L S +E E+G + +VEPR G S T+ +S S
Sbjct: 318 LERSDSEMRENEAGDEKTSVEPRSDGVSTSSQDTAGLSES 357
>SB_44587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 876
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 147 RVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVR 22
R + S RE +RR R+ L VF + S RSGY R
Sbjct: 44 RDTESSREHKRRDSGEMLRTNLKVFRVAGPSVFLRSGYEFSR 85
>SB_40863| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1236
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 44 LRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDS 220
LRS RVKKKTD + + + ++C++ + P G +I+ P S
Sbjct: 1121 LRSTSYRVKKKTDCYKVPSEVPDKTPTAAYDCDSSADEDDTPATPAPPGIPTAITDPPS 1179
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 32 LYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECET-RLVKSHCLEPPDSRG 190
L PDL ++ + ++ D D + RR +R CE R+ K C+ D+ G
Sbjct: 232 LLPDLLKKELQETQENDEKDKPRVVLIERRGTRETCENKRVKKGDCVNVVDNFG 285
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 210 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSR 94
+D++ P+ GS++ T R S SK +R SP GSR
Sbjct: 1675 RDLIKHSPQ---GSRESLDTGRRSPSKGNKKRASPHGSR 1710
>SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 114 RSPFGSRRSMLSVFFLTRASRLRRSGYNSVRCRGS 10
R+ FG +M F TR+S R GY + CR S
Sbjct: 224 RNAFGFS-AMRKTCFATRSSCFRSFGYEKILCRYS 257
>SB_57377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 25.4 bits (53), Expect = 7.3
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 32 LYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISL 211
L+ ++S A V+++ S L P LR+ F + ++ L P DS G T+S S
Sbjct: 53 LFHVIQSASAAVEQQPSSSSL--PMKLRKLPPSFFKQPTILDPSKLAPDDSSGLTISHSR 110
Query: 212 PDSA 223
+S+
Sbjct: 111 ANSS 114
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 62 RVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSR 187
+VK SIDL+D +G + +S + E L+ PPD++
Sbjct: 1047 KVKSPVLSIDLKDTSGQKLEISGLKEEIELIVE---GPPDAK 1085
>SB_12826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 210 KDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSR 94
+D++ P+ GS++ T R S SK +R SP GSR
Sbjct: 133 RDLIKHSPQ---GSRESLDTGRRSPSKGNKKRASPHGSR 168
>SB_3173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -2
Query: 168 KQCDFTSRVSHSKRETR---RRSPFGSRRSMLSVFFLTRASRLRRSGY 34
K+ + S ++K++T ++SP G+R +L+V F A R+ + Y
Sbjct: 17 KKMEEDSVPKNTKKQTSWAMKKSPSGARSEVLNVIFTVSAPRILEAFY 64
>SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18)
Length = 1044
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 17 RHRTELYPDLRSRDARVKKKTDSIDL 94
+H T + L+ R ++++KK+ SID+
Sbjct: 557 KHHTGTFASLKRRISKMRKKSRSIDI 582
>SB_47075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 192 EPRESGGSKQCDFTSRVSHSKRETRRRS 109
EP+E+ KQC F++ + +R R R+
Sbjct: 16 EPQENDQKKQCKFSAFGTFFRRHARNRT 43
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 14 PRHRTELYPDLRSRDARVKKKT 79
P+HR EL+PD R +KT
Sbjct: 1230 PKHRDELHPDTTKRGRARAEKT 1251
>SB_24049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 122 VSRFECETRLVKSHCLEPPDSRGSTVSISLPDSA 223
+S EC++R VK CL+ +V IS D A
Sbjct: 32 ISYAECDSRRVKVRCLDTNQCVKGSVVISNGDKA 65
>SB_4725| Best HMM Match : Mt_ATP-synt_D (HMM E-Value=1.4)
Length = 465
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 65 VKKKTDSIDLRDPNGLRRR 121
VK+K+DS +DPN L+RR
Sbjct: 175 VKQKSDSKIPKDPNRLKRR 193
>SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074)
Length = 996
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 198 TVEPRESGGSK-QCDFTSRVSHSKRETRR 115
TV+ R G K C SRV HSK T++
Sbjct: 918 TVKTRRIGDGKIMCGDASRVKHSKSATQK 946
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 20 HRTELYPDLRSRDARVKKKTDSIDLRDPNGLR 115
HR P + R R KT S+D++ NG R
Sbjct: 140 HRDGAEPVAKPRTHRKSSKTSSLDIKLKNGSR 171
>SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25)
Length = 401
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -2
Query: 186 RESGGSKQCDFTSRVSHSKRETR----RRSPFGSRRSMLSVFFLTRASRLRRSGYNSVRC 19
R+ +QC SR SH KR+ + + + R+ + R R RR G + +C
Sbjct: 11 RQKCRQRQCLKMSRDSHEKRQKKAVKMKHATSSGRKEKIKPASHDRPRRRRRMGSDDKKC 70
Query: 18 RGSE 7
G+E
Sbjct: 71 -GAE 73
>SB_1694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 782
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 20 HRTELYPDLRSRDARVKKKTDSI-DLRDPN 106
HR Y D++ R R K+K ++I D+ D N
Sbjct: 250 HRPSFYEDMQYRFKRNKRKNENIEDIYDGN 279
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,183,818
Number of Sequences: 59808
Number of extensions: 139399
Number of successful extensions: 563
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 16,821,457
effective HSP length: 63
effective length of database: 13,053,553
effective search space used: 300231719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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