Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0875
(262 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 1.2
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 1.2
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 28 6.2
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 28 6.2
BC117276-1|AAI17277.1| 420|Homo sapiens reticulon 4 receptor-li... 28 6.2
BC113673-1|AAI13674.1| 420|Homo sapiens reticulon 4 receptor-li... 28 6.2
AY250221-1|AAP82838.1| 420|Homo sapiens nogo receptor-like 3 pr... 28 6.2
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 28 6.2
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 28 6.2
AF532858-1|AAP21835.1| 420|Homo sapiens Nogo-66 receptor homolo... 28 6.2
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 248 TPLRPKPA*PNPARICSLWSPESRE 174
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 248 TPLRPKPA*PNPARICSLWSPESRE 174
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 246 ASKAEASLAESGKDMLTVEPRESGGSKQ 163
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 246 ASKAEASLAESGKDMLTVEPRESGGSKQ 163
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC117276-1|AAI17277.1| 420|Homo sapiens reticulon 4 receptor-like
2 protein.
Length = 420
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 14 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 193
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 194 TVSISLP 214
+S LP
Sbjct: 400 ALSAGLP 406
>BC113673-1|AAI13674.1| 420|Homo sapiens reticulon 4 receptor-like
2 protein.
Length = 420
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 14 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 193
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 194 TVSISLP 214
+S LP
Sbjct: 400 ALSAGLP 406
>AY250221-1|AAP82838.1| 420|Homo sapiens nogo receptor-like 3
protein.
Length = 420
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 14 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 193
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 194 TVSISLP 214
+S LP
Sbjct: 400 ALSAGLP 406
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 246 ASKAEASLAESGKDMLTVEPRESGGSKQ 163
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 246 ASKAEASLAESGKDMLTVEPRESGGSKQ 163
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AF532858-1|AAP21835.1| 420|Homo sapiens Nogo-66 receptor homolog-1
protein.
Length = 420
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 14 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 193
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 194 TVSISLP 214
+S LP
Sbjct: 400 ALSAGLP 406
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,672,090
Number of Sequences: 237096
Number of extensions: 643762
Number of successful extensions: 2109
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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