Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0868
         (798 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0162 + 1820761-1821855                                           29   3.2  
10_01_0346 - 3828511-3828635,3829124-3829154,3829368-3830555           28   7.5  
08_02_1604 - 28163318-28163347,28164594-28164911                       28   7.5  
02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757     28   7.5  
02_03_0277 + 17218693-17219188,17219278-17220269                       28   7.5  

>10_01_0162 + 1820761-1821855
          Length = 364

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 525 DRREWKEKLAVPTPPSGIRWRKR 457
           D+++W+   AV +P SG RW+ R
Sbjct: 342 DKKQWRGAGAVHSPSSGFRWKHR 364


>10_01_0346 - 3828511-3828635,3829124-3829154,3829368-3830555
          Length = 447

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 591 LPCMECVNDDMRERGVSVEMTADRREWKEKLAVPTPPSGIRWRK 460
           LP M+C++D + + G+  ++          LA   PPS   +RK
Sbjct: 132 LPAMQCLHDALAQLGLDKQVAVTTAHNLGVLATSYPPSSAYFRK 175


>08_02_1604 - 28163318-28163347,28164594-28164911
          Length = 115

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 116 PNWDEALSTPFPPS 75
           PNWD+ L+ P PPS
Sbjct: 53  PNWDDKLTLPLPPS 66


>02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757
          Length = 397

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 700 PSTLHYHFHTSPSHMHLLSTHTCPKP 777
           P+   YH   SP H+ L +TH  P P
Sbjct: 198 PAAAAYHAQVSPFHLQLDTTHPHPPP 223


>02_03_0277 + 17218693-17219188,17219278-17220269
          Length = 495

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 573 VNDDMRERGVSVEMTADRREWKEKLAVPTPPSGIRW 466
           V + M E     E+     EWKE+ A+   PSG  W
Sbjct: 443 VREVMEEEIKGKEVRQRATEWKERAAMAVVPSGTSW 478


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,573,953
Number of Sequences: 37544
Number of extensions: 406040
Number of successful extensions: 972
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)