Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0868
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    42   2e-05
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    40   9e-05
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    27   0.51 
U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    24   4.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   4.7  
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    23   8.3  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +2

Query: 23  WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
           WP+ SPDLNP++  +W  L+    ++P  + + L T        ID    R  I D   R
Sbjct: 188 WPALSPDLNPIE-NLWSTLKRHVKNQPARSADDLWTRCEAMWKRIDRSECRNLIGDMALR 246

Query: 203 LKACIQNHGGHFE 241
            +  I N+G H +
Sbjct: 247 CEEVIVNNGHHID 259


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 39.9 bits (89), Expect = 9e-05
 Identities = 22/69 (31%), Positives = 35/69 (50%)
 Frame = +2

Query: 23  WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
           WP+ SPDLNP++  +W  L+ +  ++P  + + L T        ID    R  I D  +R
Sbjct: 260 WPALSPDLNPIE-NLWSTLKRQLKNQPARSADDLWTRCKFMWERIDRSESRNLIGDMAKR 318

Query: 203 LKACIQNHG 229
            +  I N+G
Sbjct: 319 CQEVIANNG 327


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 15/69 (21%), Positives = 33/69 (47%)
 Frame = +2

Query: 23  WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
           WP+ SPDLNP++  +W   +++       +L+ L   + +  + I  + ++  +    +R
Sbjct: 178 WPALSPDLNPIE-NLWAIFKKRLGKNIPEDLDHLFDHMQEVWSKIPPETIQNLVMSMRQR 236

Query: 203 LKACIQNHG 229
           +   I   G
Sbjct: 237 MINVIVGDG 245


>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 20  DWPSSSPDLNPLD 58
           +W + SPDLNP++
Sbjct: 77  NWTAQSPDLNPIE 89


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 531  TADRREWKEKLAVPTPPSGIRWRKRR 454
            TA RRE +     PTPP+  R  +RR
Sbjct: 1119 TARRREERRAGLPPTPPASPRTAQRR 1144


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +2

Query: 8   IRHEDWPSSSPDLNPLDYKI 67
           +  +D P   PD++P+D+ +
Sbjct: 46  VEKDDSPKDKPDIDPVDFLV 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,105
Number of Sequences: 2352
Number of extensions: 17205
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)