Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0868
(798 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 37 0.073
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 34 0.52
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 34 0.52
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 34 0.52
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 34 0.52
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 34 0.52
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 33 0.90
BC042045-1|AAH42045.1| 890|Homo sapiens GARNL1 protein protein. 33 1.6
AY596971-1|AAT49272.1| 2083|Homo sapiens tuberin-like protein 1 ... 33 1.6
AY596970-1|AAT49271.1| 2036|Homo sapiens tuberin-like protein 1 ... 33 1.6
AK126975-1|BAC86772.1| 702|Homo sapiens protein ( Homo sapiens ... 33 1.6
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 37.1 bits (82), Expect = 0.073
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL+P DY ++HL+ K N + + + + D I+ R
Sbjct: 272 PPYSPDLSPTDYHFFKHLDNFLQGKRFHNQQDAENAFQEFVESRSTDFYATGINKLISRW 331
Query: 206 KACIQNHGGHFE 241
+ C+ +G +F+
Sbjct: 332 QKCVDCNGSYFD 343
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P +Y +++HL K N + + + + D I+ R
Sbjct: 600 PPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEFVESQSTDFYATGINQLISRW 659
Query: 206 KACIQNHGGHFE 241
+ C+ +G +F+
Sbjct: 660 QKCVDCNGSYFD 671
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P +Y +++HL K N + + + + D I+ R
Sbjct: 273 PPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEFVESQSTDFYATGINQLISRW 332
Query: 206 KACIQNHGGHFE 241
+ C+ +G +F+
Sbjct: 333 QKCVDCNGSYFD 344
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P +Y +++HL K N + + + + D I+ R
Sbjct: 358 PPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEFVESQSTDFYATGINQLISRW 417
Query: 206 KACIQNHGGHFE 241
+ C+ +G +F+
Sbjct: 418 QKCVDCNGSYFD 429
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P +Y +++HL K N + + + + D I+ R
Sbjct: 600 PPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEFVESQSTDFYATGINQLISRW 659
Query: 206 KACIQNHGGHFE 241
+ C+ +G +F+
Sbjct: 660 QKCVDCNGSYFD 671
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 34.3 bits (75), Expect = 0.52
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P +Y +++HL K N + + + + D I+ R
Sbjct: 600 PPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEFVESQSTDFYATGINQLISRW 659
Query: 206 KACIQNHGGHFE 241
+ C+ +G +F+
Sbjct: 660 QKCVDCNGSYFD 671
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 33.5 bits (73), Expect = 0.90
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P +Y +++HL K N + + + + D I+ R
Sbjct: 600 PPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEFVESQSTDFYATGINQLIFRW 659
Query: 206 KACIQNHGGHFE 241
+ C+ +G +F+
Sbjct: 660 QKCVDCNGSYFD 671
>BC042045-1|AAH42045.1| 890|Homo sapiens GARNL1 protein protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 23 WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
+P S DL +DY + HLE +P + +S ++S ++ ++ + I R
Sbjct: 303 FPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVTEVKTQMQHGLISIAART 362
Query: 203 LKACIQNHGGHF 238
+ + NH GH+
Sbjct: 363 VITHLVNHLGHY 374
>AY596971-1|AAT49272.1| 2083|Homo sapiens tuberin-like protein 1
isoform 2 protein.
Length = 2083
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 23 WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
+P S DL +DY + HLE +P + +S ++S ++ ++ + I R
Sbjct: 1449 FPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVTEVKTQMQHGLISIAART 1508
Query: 203 LKACIQNHGGHF 238
+ + NH GH+
Sbjct: 1509 VITHLVNHLGHY 1520
>AY596970-1|AAT49271.1| 2036|Homo sapiens tuberin-like protein 1
isoform 1 protein.
Length = 2036
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 23 WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
+P S DL +DY + HLE +P + +S ++S ++ ++ + I R
Sbjct: 1449 FPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVTEVKTQMQHGLISIAART 1508
Query: 203 LKACIQNHGGHF 238
+ + NH GH+
Sbjct: 1509 VITHLVNHLGHY 1520
>AK126975-1|BAC86772.1| 702|Homo sapiens protein ( Homo sapiens
cDNA FLJ45028 fis, clone BRAWH3018063, highly similar
to Rattus norvegicus tuberin-like protein 1 (Tulip1). ).
Length = 702
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 23 WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
+P S DL +DY + HLE +P + +S ++S ++ ++ + I R
Sbjct: 67 FPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVTEVKTQMQHGLISIAART 126
Query: 203 LKACIQNHGGHF 238
+ + NH GH+
Sbjct: 127 VITHLVNHLGHY 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,008,301
Number of Sequences: 237096
Number of extensions: 2145843
Number of successful extensions: 3869
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3869
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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