Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0868
         (798 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase pr...    40   0.003
X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.         35   0.11 
AY089564-1|AAL90302.1|  422|Drosophila melanogaster RE03692p pro...    29   9.7  
AE014296-2966|AAF49301.2|  422|Drosophila melanogaster CG5582-PA...    29   9.7  

>U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase
           protein.
          Length = 345

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +2

Query: 20  DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDL-VRAAIDDWP 196
           D P  SPDLNP++  +W +L++K   +     + L  ++I+    I ++  ++  I    
Sbjct: 271 DTPPQSPDLNPIE-NLWAYLKKKVAKRGPKTRQQLMAAIIEEWEKIPLEYDLKKLIHSMK 329

Query: 197 RRLKACIQNHGGH 235
           +RL+   + +GGH
Sbjct: 330 KRLQLVAKANGGH 342


>X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.
          Length = 339

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 16/70 (22%), Positives = 33/70 (47%)
 Frame = +2

Query: 23  WPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRR 202
           WP  SPDLN ++  +W  ++ +     +   E     + +  + + ++  +  +   P+R
Sbjct: 267 WPPQSPDLNIIE-NVWAFIKNQRTIDKNRKREGAIIEIAEIWSKLTLEFAQTLVRSIPKR 325

Query: 203 LKACIQNHGG 232
           L+A I   GG
Sbjct: 326 LQAVIDAKGG 335


>AY089564-1|AAL90302.1|  422|Drosophila melanogaster RE03692p
           protein.
          Length = 422

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 321 QLFYIKHVTEFMT*LCINIFF 383
           +LFYIKH+ ++M  LC+  FF
Sbjct: 250 KLFYIKHLFKYMLPLCLVYFF 270


>AE014296-2966|AAF49301.2|  422|Drosophila melanogaster CG5582-PA
           protein.
          Length = 422

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 321 QLFYIKHVTEFMT*LCINIFF 383
           +LFYIKH+ ++M  LC+  FF
Sbjct: 250 KLFYIKHLFKYMLPLCLVYFF 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,260,556
Number of Sequences: 53049
Number of extensions: 682123
Number of successful extensions: 1705
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)