Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0868
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 97 1e-20
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 53 3e-07
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 53 3e-07
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 53 3e-07
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 53 3e-07
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 52 4e-07
U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical pr... 40 0.002
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 40 0.002
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 40 0.003
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 31 1.3
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 30 2.2
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 29 2.9
Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical p... 28 6.7
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 28 8.9
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 28 8.9
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 28 8.9
AF038612-2|AAB92044.1| 507|Caenorhabditis elegans Hypothetical ... 28 8.9
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = +2
Query: 2 DFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAA 181
DFI WP SSPDLNP+DY +W LE KACSKPH N++SLK SL KA ++D++ +RA
Sbjct: 330 DFIAFNQWPPSSPDLNPMDYSVWSVLEAKACSKPHRNIDSLKDSLKKAWDELDINYLRAT 389
Query: 182 IDDWPRRLKA 211
+D +PRRL+A
Sbjct: 390 VDSFPRRLEA 399
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 152 DIDMDLVRAAIDDWPRRLKACIQNHGGHFE 241
++++ +RA +D +P+R++ CI+ G FE
Sbjct: 419 ELEIPYLRATVDAFPKRVRVCIEADGDIFE 448
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPR 199
DWPS SPDLNP+++ +W+ LE + N ++ L A I M ++ ID PR
Sbjct: 200 DWPSQSPDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPR 258
Query: 200 RLKACIQNHG 229
R +A I +G
Sbjct: 259 RCQAVIDANG 268
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPR 199
DWPS SPDLNP+++ +W+ LE + N ++ L A I M ++ ID PR
Sbjct: 270 DWPSQSPDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPR 328
Query: 200 RLKACIQNHG 229
R +A I +G
Sbjct: 329 RCQAVIDANG 338
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPR 199
DWPS SPDLNP+++ +W+ LE + N ++ L A I M ++ ID PR
Sbjct: 200 DWPSQSPDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPR 258
Query: 200 RLKACIQNHG 229
R +A I +G
Sbjct: 259 RCQAVIDANG 268
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPR 199
DWPS SPDLNP+++ +W+ LE + N ++ L A I M ++ ID PR
Sbjct: 200 DWPSQSPDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPR 258
Query: 200 RLKACIQNHG 229
R +A I +G
Sbjct: 259 RCQAVIDANG 268
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPR 199
DWPS SPDLNP+++ +W+ LE + N ++ L A I M ++ ID PR
Sbjct: 270 DWPSQSPDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPR 328
Query: 200 RLKACIQNHG 229
R +A I +G
Sbjct: 329 RCQAVIDANG 338
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPR 199
DWPS SPDLNP+++ +W+ LE + N ++ L A I M ++ ID PR
Sbjct: 241 DWPSQSPDLNPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPR 299
Query: 200 RLKACIQNHG 229
R +A I +G
Sbjct: 300 RCQAFIDANG 309
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPR 199
DWPS SPDLNP+++ +W+ LE + N ++ L A I M ++ ID PR
Sbjct: 270 DWPSQSPDLNPIEH-LWEKLERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPR 328
Query: 200 RLKACIQNHG 229
R +A I +G
Sbjct: 329 RCQAVIDANG 338
>U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical
protein K10B3.2 protein.
Length = 141
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEE--KACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDW 193
DWP+ SPDLNP++ +W L A +K +P + SLK ++ A I + +++ +
Sbjct: 66 DWPARSPDLNPIE-NLWGILVRIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSM 124
Query: 194 PRRLKACIQNHG 229
RL I+ G
Sbjct: 125 EDRLFEIIRTQG 136
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEE--KACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDW 193
DWP+ SPDLNP++ +W L A +K +P + SLK ++ A I + +++ +
Sbjct: 254 DWPARSPDLNPIE-NLWGILVRIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSM 312
Query: 194 PRRLKACIQNHG 229
RL I+ G
Sbjct: 313 EDRLFEIIRTQG 324
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEE--KACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDW 193
DWP+ SPDLNP++ +W L A +K +P + SLK ++ A I + +++ +
Sbjct: 254 DWPARSPDLNPIE-NLWGILVRIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSM 312
Query: 194 PRRLKACIQNHG 229
RL I+ G
Sbjct: 313 EDRLFEIIRTQG 324
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 20 DWPSSSPDLNPLDYKIWQHLEE--KACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDW 193
DWP+ SPDLNP++ +W L A +K +P + SLK ++ A I + +++ +
Sbjct: 384 DWPARSPDLNPIE-NLWGILVRIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSM 442
Query: 194 PRRLKACIQNHG 229
RL I+ G
Sbjct: 443 EDRLFENIRTQG 454
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P DY ++ L + K + E LKT L + D I P +
Sbjct: 267 PPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRSPDFFSRGIMMLPSKW 326
Query: 206 KACIQNHG 229
+ + +G
Sbjct: 327 QQVVDTNG 334
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P DY ++ L + K + E LKT L + D I P +
Sbjct: 242 PPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRSPDFFSRGIMMLPSKW 301
Query: 206 KACIQNHG 229
+ + +G
Sbjct: 302 QQVVDTNG 309
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRL 205
P SPDL P DY +++ L+ + + ++++T L A + I P R
Sbjct: 239 PPYSPDLAPTDYHLFRSLQNHLAGQKFHDRKAVETWLDDFFASKSQEFYAEGIAQLPLRW 298
Query: 206 KACIQNHG 229
+ I +G
Sbjct: 299 QEVIDTNG 306
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 26 PSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSL 136
P SPDL P DY ++ L + K + E LKT L
Sbjct: 267 PPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTEL 303
>Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical
protein T22C1.1 protein.
Length = 356
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 371 NT*SGHKFCHMFNVK*LKQVYSLYNHSY 288
N+ G K C ++ K K Y++YNH+Y
Sbjct: 107 NSKFGEKKCALYEDKDAKNEYNMYNHNY 134
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 317 QVYSLYNHSYTKMNLIKHRFLDTKVIQNDLRDFEYRP 207
+ Y LYNH+Y MN +KH L + N F Y P
Sbjct: 59 KTYELYNHTY--MNNMKH-MLAAGWMDNSSNPFAYNP 92
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 317 QVYSLYNHSYTKMNLIKHRFLDTKVIQNDLRDFEYRP 207
+ Y LYNH+Y MN +KH L + N F Y P
Sbjct: 48 KTYELYNHTY--MNNMKH-MLAAGWMDNSSNPFAYNP 81
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 317 QVYSLYNHSYTKMNLIKHRFLDTKVIQNDLRDFEYRP 207
+ Y LYNH+Y MN +KH L + N F Y P
Sbjct: 48 KTYELYNHTY--MNNMKH-MLAAGWMDNSSNPFAYNP 81
>AF038612-2|AAB92044.1| 507|Caenorhabditis elegans Hypothetical
protein F13B6.2 protein.
Length = 507
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 113 LESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE 241
+ SLK +L A ++D++ +RA +D P+ L G+F+
Sbjct: 1 MNSLKIALTAAWDNLDVNYLRAVVDSHPKGLWPLSNQKEGYFK 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,799,610
Number of Sequences: 27780
Number of extensions: 358491
Number of successful extensions: 911
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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