Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0830
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      28   5.8  
Z81055-9|CAB02898.3|  562|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -1

Query: 517 PRVMSGRPATSPSCPTALRS--PEAFTIVP 434
           PR ++ R  T P+CPT  RS  P   T VP
Sbjct: 344 PRALTSRAPTGPACPTTTRSAAPATRTAVP 373


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +3

Query: 417 NDALELGTIVNASGDRKAVGHDGEVAGLPDITRGSLHLSKRPKALLYVHE 566
           N  +EL  + NA    + V H G + G+     G    S    A L+VHE
Sbjct: 700 NSTIELWDVANAKLYSRFVNHTGGILGIAWSADGRRIASVGKDATLFVHE 749


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 122  GST-TNPSNERSSTAMV*TSILNSSVGSSLPCGRTTECTSRSTT 250
            GST T PS    ST+   T  + S+ GSS P   T++ T+ ST+
Sbjct: 938  GSTVTQPSTVSDSTSSGSTVTVGSTEGSSSPIPSTSQNTNPSTS 981


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +3

Query: 417 NDALELGTIVNASGDRKAVGHDGEVAGLPDITRGSLHLSKRPKALLYVHE 566
           N  +EL  + NA    + V H G + G+     G    S    A L+VHE
Sbjct: 700 NSTIELWDVANAKLYSRFVNHTGGILGIAWSADGRRIASVGKDATLFVHE 749


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +3

Query: 417 NDALELGTIVNASGDRKAVGHDGEVAGLPDITRGSLHLSKRPKALLYVHE 566
           N  +EL  + NA    + V H G + G+     G    S    A L+VHE
Sbjct: 700 NSTIELWDVANAKLYSRFVNHTGGILGIAWSADGRRIASVGKDATLFVHE 749


>Z81055-9|CAB02898.3|  562|Caenorhabditis elegans Hypothetical
           protein F01G10.10 protein.
          Length = 562

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +2

Query: 5   WVGNGQEIVRKYFPL---NFRLIMAGNYVKII 91
           W+ +GQEI R Y PL   N   +  G Y++I+
Sbjct: 13  WLSSGQEITRDYSPLLDKNTSAVNPGIYLRIM 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,599,607
Number of Sequences: 27780
Number of extensions: 242586
Number of successful extensions: 1014
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)