Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0828
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   3.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.2  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   4.2  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   4.2  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   4.2  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   5.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   5.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.3  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   9.6  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 525 TRNTLYFNTIYSNY*NHQKYYS 590
           +  T++ N  Y+NY N + YY+
Sbjct: 308 SNKTIHNNNNYNNYNNKKLYYN 329


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 513 SYNSTRNTLYFNTIYSNY*NHQKYYSTWNFSST 611
           +Y+S  NTL +  + SN   + K+ +  N SST
Sbjct: 300 AYSSLENTLKYYEVGSNVPFNFKFITDANSSST 332


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 600 SSRSNNISDGFNNYYKWY*N 541
           SS SNN +   NNY K Y N
Sbjct: 83  SSLSNNYNYNNNNYKKLYCN 102


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 600 SSRSNNISDGFNNYYKWY*N 541
           SS SNN +   NNY K Y N
Sbjct: 83  SSLSNNYNYNNNNYKKLYCN 102


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 600 SSRSNNISDGFNNYYKWY*N 541
           SS SNN +   NNY K Y N
Sbjct: 83  SSLSNNYNYNNNNYKKLYCN 102


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 507 YYSYNSTRNTLYFNTIYSNY*NHQKYY 587
           Y +YN+  N  Y N   +NY    K Y
Sbjct: 94  YNNYNNNYNNNYNNNYNNNYKKLYKNY 120


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 507 YYSYNSTRNTLYFNTIYSNY*NHQKYY 587
           Y +YN+  N  Y N   +NY    K Y
Sbjct: 94  YNNYNNNYNNNYNNNYNNNYKKLYKNY 120


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 492 KIQITYYSYNSTRNTLYFNT 551
           K Q  YYS  S+ N  Y NT
Sbjct: 258 KTQNLYYSAMSSHNLNYVNT 277


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 513 SYNSTRNTLYFNTIYSNY 566
           S+  T N  YF+  Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 98  NLLIRCIFFFINEVIY 51
           N    C+F F+N ++Y
Sbjct: 144 NFKAYCLFSFLNTIVY 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,367
Number of Sequences: 438
Number of extensions: 2353
Number of successful extensions: 29
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)