Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0827
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = -1

Query: 257 ILRTSELFLSPL*TEAGVSLDNKQSPSPTDINNAKGAVKPLP 132
           I+       SP  T    S  N   P+ +D+N       PLP
Sbjct: 416 IINPQPQITSPSNTNTSTSSTNSNKPNSSDLNMLIKETMPLP 457


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 614 PRLSKFFEISLICSFSSVKHP 552
           P+L   F  S +C F S K P
Sbjct: 142 PQLGSLFRSSRMCFFKSSKKP 162


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 614 PRLSKFFEISLICSFSSVKHP 552
           P+L   F  S +C F S K P
Sbjct: 142 PQLGSLFRSSRMCFFKSSKKP 162


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 614 PRLSKFFEISLICSFSSVKHP 552
           P+L   F  S +C F S K P
Sbjct: 142 PQLGSLFRSSRMCFFKSSKKP 162


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 614 PRLSKFFEISLICSFSSVKHP 552
           P+L   F  S +C F S K P
Sbjct: 142 PQLGSLFRSSRMCFFKSSKKP 162


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 414 HKFKNNLLIRNPRHF 370
           H F NN++    +HF
Sbjct: 242 HSFSNNVIAERKKHF 256


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 414 HKFKNNLLIRNPRHF 370
           H F NN++    +HF
Sbjct: 242 HSFSNNVIAERKKHF 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,136
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)