Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0827
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0468 + 3629974-3631051,3631102-3632649,3632766-3633133           29   4.1  
05_06_0094 + 25477367-25477398,25477516-25477891,25478292-254783...    28   7.2  
05_01_0125 - 853691-853984,854027-854659                               28   7.2  
03_03_0208 + 15459260-15459922                                         28   7.2  
10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376           27   9.6  
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973...    27   9.6  

>11_01_0468 + 3629974-3631051,3631102-3632649,3632766-3633133
          Length = 997

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 242 ELFLSPL*TEAGVSLDNKQSPSPTDINNAK 153
           E+F  P   E G +L+N     PT+I NAK
Sbjct: 465 EIFRIPTIAEVGFALNNLSGELPTEIGNAK 494


>05_06_0094 +
           25477367-25477398,25477516-25477891,25478292-25478315,
           25479069-25481828
          Length = 1063

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 153 GRREAASYHREQILGTSVPSNSSPYA 76
           G R++ S  R ++ G +VPSN+ PY+
Sbjct: 571 GFRQSPSSERMEVHGYAVPSNNDPYS 596


>05_01_0125 - 853691-853984,854027-854659
          Length = 308

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 3   TYSRPCTG*TLNSSGKQPGYQVRGEHTVNCLTG 101
           T  RPC G TL S G++P Y     H +N  TG
Sbjct: 126 TSPRPCRGLTLVSDGREPRY-----HLLNLSTG 153


>03_03_0208 + 15459260-15459922
          Length = 220

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = -3

Query: 177 AHGHQQCQGRREAASYHREQIL----GTSVPSNSSPYAPPVPD--ILAVCLRS 37
           A G ++ Q R     Y RE+ L     TS P  +SP  PP P+  ++ +CLR+
Sbjct: 62  AAGEEEGQDR----GYQRERFLLRPCSTSTPREASPPLPPPPEPPMVVLCLRA 110


>10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376
          Length = 746

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 189 AITIAHGHQQCQGRREAASYHREQILGTSV-PSNSSPYAPPVPDILA 52
           A+ +       QG RE   +H E  + + +  S+S+P +PPVPD  A
Sbjct: 126 AVKVMDAAGSLQGERE---FHNEIAVASHLLASSSAPGSPPVPDAAA 169


>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
            21997494-21997838,21998323-21999240,21999312-21999640,
            21999709-21999832,21999901-22000071,22000188-22001648,
            22002647-22002910,22003866-22004189
          Length = 1831

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 309  IDLGYYNRLRVLL*ILCYLENVRAVFIA 226
            ID+   N+LR  L  LCYL + R +FIA
Sbjct: 1167 IDILEVNKLRRQLLFLCYLWDQRLIFIA 1194


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,592,852
Number of Sequences: 37544
Number of extensions: 323643
Number of successful extensions: 822
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)