BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVf0827 (641 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 2.5 AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 23 2.5 AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 2.5 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.3 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.3 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.4 >AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin protein. Length = 339 Score = 23.0 bits (47), Expect = 2.5 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = -3 Query: 171 GHQQCQGRREAASYHRE 121 GHQ+ QG++ +AS + E Sbjct: 33 GHQEMQGKQNSASLNSE 49 >AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin protein. Length = 215 Score = 23.0 bits (47), Expect = 2.5 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = -3 Query: 171 GHQQCQGRREAASYHRE 121 GHQ+ QG++ +AS + E Sbjct: 33 GHQEMQGKQNSASLNSE 49 >AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin protein. Length = 301 Score = 23.0 bits (47), Expect = 2.5 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = -3 Query: 171 GHQQCQGRREAASYHRE 121 GHQ+ QG++ +AS + E Sbjct: 33 GHQEMQGKQNSASLNSE 49 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.6 bits (46), Expect = 3.3 Identities = 7/19 (36%), Positives = 10/19 (52%) Frame = +3 Query: 408 TYVRYLYCFIRTVCGHHPK 464 TY + Y ++CG H K Sbjct: 38 TYFHHTYIIYESLCGRHEK 56 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.6 bits (46), Expect = 3.3 Identities = 7/19 (36%), Positives = 10/19 (52%) Frame = +3 Query: 408 TYVRYLYCFIRTVCGHHPK 464 TY + Y ++CG H K Sbjct: 38 TYFHHTYIIYESLCGRHEK 56 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 22.2 bits (45), Expect = 4.4 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +1 Query: 1 GHTQDHAPARPSTP 42 GHT H P P TP Sbjct: 460 GHTPHHHPHPPETP 473 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 176,163 Number of Sequences: 438 Number of extensions: 3902 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19315974 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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