Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0826
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   5.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.3  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   7.3  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   7.3  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   7.3  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   7.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   7.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.7  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 492 PGLHPRRSEARQE 454
           PG+HPR+ +  Q+
Sbjct: 219 PGMHPRQQQQAQQ 231


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 241 HEKDKKIIKNPKTLHSNSEHE 303
           HEK  KII +    H++ +HE
Sbjct: 110 HEKGLKIILDFVPNHTSDQHE 130


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 246 ERQKNNQKSENTPFKFR 296
           ER+K + K+EN+  K+R
Sbjct: 44  EREKKSYKNENSYRKYR 60


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 246 ERQKNNQKSENTPFKFR 296
           ER+K + K+EN+  K+R
Sbjct: 44  EREKKSYKNENSYRKYR 60


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 246 ERQKNNQKSENTPFKFR 296
           ER+K + K+EN+  K+R
Sbjct: 44  EREKKSYKNENSYRKYR 60


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 246 ERQKNNQKSENTPFKFR 296
           ER+K + K+EN+  K+R
Sbjct: 44  EREKKSYKNENSYRKYR 60


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 246 ERQKNNQKSENTPFKFR 296
           ER+K + K+EN+  K+R
Sbjct: 277 EREKKSYKNENSYRKYR 293


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 241 HEKDKKIIKNPKTLHSNSEHE 303
           HEK  KII +    H++ +HE
Sbjct: 110 HEKGLKIILDFVPNHTSDQHE 130


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 364 NANLSPSMSATHEHV 408
           N++L PS+++ H H+
Sbjct: 276 NSSLQPSLASHHSHL 290


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +1

Query: 109 NKACNGFKISWPSIVFLCRK 168
           NK    F + W    F+C K
Sbjct: 37  NKTVREFNVYWNVPTFMCHK 56


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 315 LPTTEQRLGASQSAPLKRQ 371
           LP    R+G   ++PLKR+
Sbjct: 378 LPAVLSRIGIILASPLKRE 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,789
Number of Sequences: 438
Number of extensions: 3349
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)