Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0824
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q07ZG9 Cluster: Response regulator receiver modulated m...    36   0.72 
UniRef50_A5FPX1 Cluster: RDD domain containing protein; n=3; Deh...    34   3.8  
UniRef50_Q64QL1 Cluster: Putative uncharacterized protein; n=5; ...    33   5.1  
UniRef50_A7SIS0 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.1  
UniRef50_A7EIG1 Cluster: Predicted protein; n=1; Sclerotinia scl...    33   5.1  
UniRef50_A0Q446 Cluster: Hypothetical membrane protein; n=9; Fra...    33   6.7  
UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  

>UniRef50_Q07ZG9 Cluster: Response regulator receiver modulated
           metal dependent phosphohydrolase; n=7;
           Alteromonadales|Rep: Response regulator receiver
           modulated metal dependent phosphohydrolase - Shewanella
           frigidimarina (strain NCIMB 400)
          Length = 520

 Score = 36.3 bits (80), Expect = 0.72
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = -2

Query: 425 SQLKPVTSATLSDFAGISSLGYQQLGMKKRVLKNSTVVNKVNSHHFSNVISFELFTFFIL 246
           ++LK    A+L  +  I ++   QLGM+K +  +S+V+     H+F + +  +      L
Sbjct: 142 TKLKSCVYASLRSYRDIKTIEQSQLGMEKVIQASSSVLLSHTLHNFGSAVLEQTLQLLNL 201

Query: 245 YSNSLHFMSF 216
            S++L+  SF
Sbjct: 202 NSSALYLTSF 211


>UniRef50_A5FPX1 Cluster: RDD domain containing protein; n=3;
           Dehalococcoides|Rep: RDD domain containing protein -
           Dehalococcoides sp. BAV1
          Length = 166

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = -3

Query: 544 VDNLVL-LISSAFVSLVHRYNLPSFWP-DLFNGFQWL 440
           +DN+++ +ISSAFV  VH + +P FW  D  +G  WL
Sbjct: 24  IDNIIISIISSAFVP-VHWFEIPVFWNIDSLSGIWWL 59


>UniRef50_Q64QL1 Cluster: Putative uncharacterized protein; n=5;
           Bacteroides|Rep: Putative uncharacterized protein -
           Bacteroides fragilis
          Length = 139

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
 Frame = -3

Query: 538 NLVLLISSAFVS--LVHRYNLPSFWPDLFNGFQWL 440
           N++ ++S  F+S  ++++   P++W DL  GF+WL
Sbjct: 53  NIMEMVSGLFLSKSIIYQNGKPAYWVDLSKGFEWL 87


>UniRef50_A7SIS0 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 2279

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 438  PNH*NPLKRSGQKLGRLYLWTRLTNALEIKSTKLSTNTTYYNIIL 572
            P+H  P +R G K  R  L T  ++ LE+ S  L T+T+ + + +
Sbjct: 1009 PSHMTPARREGTKFARRVLLTTWSSVLEVLSLPLETSTSAFIVAM 1053


>UniRef50_A7EIG1 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 245

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 289 FLMSFHLNCSLFLFFILTLYISCHLMNYQAINFR*INFILFCSI 158
           FL+SF L  SLF F    +   C + + +   F  +NFI++C++
Sbjct: 123 FLLSFLLGVSLFAFIAAVIRTYCTMGDNKDPTFNTVNFIVWCAV 166


>UniRef50_A0Q446 Cluster: Hypothetical membrane protein; n=9;
           Francisella tularensis|Rep: Hypothetical membrane
           protein - Francisella tularensis subsp. novicida (strain
           U112)
          Length = 338

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 11/33 (33%), Positives = 25/33 (75%)
 Frame = -3

Query: 292 IFLMSFHLNCSLFLFFILTLYISCHLMNYQAIN 194
           +F++ F +NCS+  + IL+L+ SC +++++ I+
Sbjct: 261 VFVLFFLVNCSISYYLILSLFASCMVISWEMIS 293


>UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 4638

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -2

Query: 302  NSHHFSNVIS-FELFTFFILYSNSLHFMSFDELPSN*FQIN 183
            N+H+ SN  S  ++FTF  +Y+N  HF  F  LP+N F +N
Sbjct: 984  NTHNNSNNNSESDIFTFLNIYNNIFHFFFF--LPTNYFTLN 1022


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,946,128
Number of Sequences: 1657284
Number of extensions: 11458122
Number of successful extensions: 26907
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26897
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)