Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0824
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.91 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.8  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   4.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 341 KRVLKNSTVVNKVNSHHFSNVISFE 267
           KR L +ST+ NK+N+H +   +S E
Sbjct: 437 KRKLSDSTM-NKINNHEYKRSVSRE 460


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 645 FFFYTRISLEILFKATQRLPG 583
           +F Y RIS   L +  +++PG
Sbjct: 26  YFIYFRISRRHLLELAEKIPG 46


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 293 HFSNVISFELFTFFILYSNSLHFMSFD 213
           HF+NVI +  F  F       + + FD
Sbjct: 2   HFNNVIKYINFDRFFFIEGMTNVLDFD 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,319
Number of Sequences: 438
Number of extensions: 3476
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)