Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0823
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   4.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   7.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.1  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 47  KACVMKHRISVCSSIILVVGFPPPCPALVSNLAS 148
           + C+   ++  C +  +  GF  P P  VSN  S
Sbjct: 135 RVCMWADQVPECKNEEVAGGFTCPAPGEVSNSGS 168


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 47  KACVMKHRISVCSSIILVVGFPPPCPALVSNLAS 148
           + C+   ++  C +  +  GF  P P  VSN  S
Sbjct: 135 RVCMWADQVPECKNEEVAGGFTCPAPGEVSNSGS 168


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  PKACVMKHRISVCSSII 94
           P  CV+ HR+  C S +
Sbjct: 134 PNQCVICHRVLSCKSAL 150


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 134 SNLASSGARCAGERPATCCSSATNFSECSGTT 229
           +NL +     +GE+P  C      FS+ S  T
Sbjct: 35  ANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVT 66



 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 164 AGERPATCCSSATNFSECSGTT 229
           +GE+P  C     +FS+ +  T
Sbjct: 17  SGEKPYRCIDCNKSFSQAANLT 38


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 134 SNLASSGARCAGERPATCCSSATNFSECSGTT 229
           +NL +     +GE+P  C      FS+ S  T
Sbjct: 291 ANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVT 322



 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 164 AGERPATCCSSATNFSECSGTT 229
           +GE+P  C     +FS+ +  T
Sbjct: 273 SGEKPYRCIDCNKSFSQAANLT 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,811
Number of Sequences: 336
Number of extensions: 1621
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)