Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0811
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ231602-1|ABA71708.1|  388|Drosophila melanogaster male accesso...    28   9.9  
AF181627-1|AAD55413.1|  708|Drosophila melanogaster BcDNA.GH0412...    28   9.9  
AE014297-2461|AAF55509.2|  708|Drosophila melanogaster CG7985-PA...    28   9.9  

>DQ231602-1|ABA71708.1|  388|Drosophila melanogaster male accessory
           gland protein protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 74  LKDDRFL-HNSVLNSVLQDFIGCTYLHDVDTIIFIITYGFL*KTIFLS*VPTVS 232
           + D  F+ HN VLN +L +  G        T  F+I+ G + K +  S +P ++
Sbjct: 207 MPDKEFMYHNGVLNKLLSNVCGLFVARVFRTTFFLISNGKISKHLNTSVIPLIA 260


>AF181627-1|AAD55413.1|  708|Drosophila melanogaster BcDNA.GH04120
           protein.
          Length = 708

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 95  HNSVLNSVLQDFIGCTYLHDVDTIIFIITYGFL*KTIFLS 214
           HN+     L+DF+ C  LH +  +  + T+G +   + LS
Sbjct: 242 HNAYKEDELRDFLECAALHGLSVMPLVQTFGHMEYVLKLS 281


>AE014297-2461|AAF55509.2|  708|Drosophila melanogaster CG7985-PA
           protein.
          Length = 708

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 95  HNSVLNSVLQDFIGCTYLHDVDTIIFIITYGFL*KTIFLS 214
           HN+     L+DF+ C  LH +  +  + T+G +   + LS
Sbjct: 242 HNAYKEDELRDFLECAALHGLSVMPLVQTFGHMEYVLKLS 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,827,078
Number of Sequences: 53049
Number of extensions: 337520
Number of successful extensions: 426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)