Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0792
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    70   2e-14
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    54   1e-09
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    40   3e-05
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    27   0.26 
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    27   0.26 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 70.1 bits (164), Expect = 2e-14
 Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = -1

Query: 499 KWTQDELTAQVFIFFLAGFESSANGLTLCIHELALNPEAQEKLYEAIIKF-KEEKGPLTY 323
           K T   + AQ F+FFLAGFE+S+  ++  ++ELALN + Q+KL E I  F  +    L Y
Sbjct: 288 KLTDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKY 347

Query: 322 DNIGELKYLDCVLNETSRKWSAA 254
           D+I E++YLD V  ET R +  A
Sbjct: 348 DDIKEMEYLDKVFKETLRMYPPA 370



 Score = 56.0 bits (129), Expect = 4e-10
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = -3

Query: 146 SIQMDPEHHPDPEKFDPDRFLDENKHKIKPFTFLPFGAGPRNCIGSRF 3
           +I  D   +P+P+ FDP+RF  +      P  +LPFG GPRNCIG+RF
Sbjct: 402 AIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARF 449



 Score = 41.1 bits (92), Expect = 1e-05
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -2

Query: 687 FFREIVTSTMDYRLKNNVERPDMIQLLMDAYKGTLKNES 571
           FF  +VT T+ YR  NN+ RPD I +LM+  K   K E+
Sbjct: 248 FFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKLEN 286


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 54.0 bits (124), Expect = 1e-09
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = -3

Query: 188 YKLQPGDIVYNSVNSIQMDPEHHPDPEKFDPDRFLDENKHKIKPFTFLPFGAGPRNCIGS 9
           Y +  G  V      +   P  +P+P+ FDPD FL E       + F+PF AGPR+C+G 
Sbjct: 432 YTIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGR 491

Query: 8   RF 3
           ++
Sbjct: 492 KY 493



 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -1

Query: 493 TQDELTAQVFIFFLAGFESSANGLTLCIHELALNPEAQEKLYEAIIK-FKEEKGPLTYDN 317
           T  E+  QV      G +++A+G +  +  +  +P+ QEK+ + + + F +   P T+ +
Sbjct: 334 TDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGDSDRPATFQD 393

Query: 316 IGELKYLDCVLNETSRKW 263
             E+KYL+  L ET R +
Sbjct: 394 TLEMKYLERCLLETLRMY 411


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 39.5 bits (88), Expect = 3e-05
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = -1

Query: 475 AQVFIFFLAGFESSANGLTLCIHELALNPEAQEKLYEAIIKFKEEKGPLTYDNIGELKYL 296
           A +  F  AG  +  N L      +  NP  Q KLYE           LT DN+ + KYL
Sbjct: 322 AAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDLTIDNLRKAKYL 381

Query: 295 DCVLNETSR 269
              + E+ R
Sbjct: 382 RACITESLR 390



 Score = 38.3 bits (85), Expect = 8e-05
 Identities = 27/103 (26%), Positives = 43/103 (41%)
 Frame = -3

Query: 311 RIEILRLCFE*DFKKMVCRIIVDRVCSKPYELPPPREGGKPYKLQPGDIVYNSVNSIQMD 132
           + + LR C     + +     + R+  +P EL         Y+L  G +V        ++
Sbjct: 377 KAKYLRACITESLRLIPTTTCIARILDEPIEL-------SGYRLTAGTVVLLHTWIAGLN 429

Query: 131 PEHHPDPEKFDPDRFLDENKHKIKPFTFLPFGAGPRNCIGSRF 3
            E+  D +K+ P+R+         P    PFGAG R C G RF
Sbjct: 430 EENFKDAKKYLPERWTTPTTPH-SPLLVAPFGAGRRICPGKRF 471



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 428 ISRAFKSRKEEDENLCGQFVLGPFSYIPFGF 520
           I R F+   EE+ +L  +F+L P   +  GF
Sbjct: 483 IIREFEIIVEEELDLQFEFILAPKGPVSLGF 513


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = -2

Query: 768 DLNDIGCTVPTLAKK*ELKVFPQKVTRFFREIVTSTMDYRLKNNVERPDMIQLLMDAYKG 589
           D++ +GC    + K+ E+     K T  + E V   ++     N    D IQL+      
Sbjct: 62  DMSQLGCLKACVMKRIEML----KGTELYVEPVYKMIEVVHAGNA---DDIQLVKGIANE 114

Query: 588 TLKNESNESDEKNVGFAMTE 529
            ++N   E+DE N+G   T+
Sbjct: 115 CIENAKGETDECNIGNKYTD 134


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = -2

Query: 768 DLNDIGCTVPTLAKK*ELKVFPQKVTRFFREIVTSTMDYRLKNNVERPDMIQLLMDAYKG 589
           D++ +GC    + K+ E+     K T  + E V   ++     N    D IQL+      
Sbjct: 62  DMSQLGCLKACVMKRIEML----KGTELYVEPVYKMIEVVHAGNA---DDIQLVKGIANE 114

Query: 588 TLKNESNESDEKNVGFAMTE 529
            ++N   E+DE N+G   T+
Sbjct: 115 CIENAKGETDECNIGNKYTD 134


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 466 FIFFLAGFESSANGLTLCIHELALNPEAQEKLYEAIIK 353
           F+F +A  +SS    T+C+ E+  + E  E   ++ +K
Sbjct: 20  FLFVIAAQDSSGRIFTICVPEI-YSKECDEMKKDSAVK 56


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 466 FIFFLAGFESSANGLTLCIHELALNPEAQEKLYEAIIK 353
           F+F +A  +SS    T+C+ E+  + E  E   ++ +K
Sbjct: 20  FLFVIAAQDSSGRIFTICVPEI-YSKECDEMKKDSAVK 56


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 466 FIFFLAGFESSANGLTLCIHELALNPEAQEKLYEAIIK 353
           F+F +A  +SS    T+C+ E+  + E  E   ++ +K
Sbjct: 20  FLFVIAAQDSSGRIFTICVPEI-YSKECDEMKKDSAVK 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,824
Number of Sequences: 438
Number of extensions: 4737
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)