Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0778
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p... 29 1.8
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p... 29 1.8
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 29 2.4
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 29 2.4
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 29 2.4
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 29 2.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 5.5
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z68338-5|CAA92758.1| 203|Caenorhabditis elegans Hypothetical pr... 27 7.2
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 27 7.2
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 27 7.2
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 27 9.5
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 9.5
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 27 9.5
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.19
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = -1
Query: 487 RSHHKCSEQTDTKQQDELATSRLS-TPFIIHLPKEAMTTSCTPRRTTKKFASSTFM--RR 317
R + +CS Q D ++LS PF +H ++ TTS T TT +T + +
Sbjct: 216 RENKECSNQLDIALYAIKHDAKLSGLPFYLHYKEDTTTTSTTDTTTTISTTKNTTVTQKP 275
Query: 316 HSSNTSSKVTSRPST--KKLICT 254
++ T+S VT +T +K I T
Sbjct: 276 KTNTTNSTVTIEETTLEEKTIAT 298
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 400 HLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSS 296
H PK ++ TP+ +T++ SST RR S + SS
Sbjct: 335 HNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSS 369
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 400 HLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSS 296
H PK ++ TP+ +T++ SST RR S + SS
Sbjct: 335 HNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSS 369
>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 398 FAQRSNDYELHTEKNYEEIRFLDIYEKTFFQY 303
FA N TE+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 398 FAQRSNDYELHTEKNYEEIRFLDIYEKTFFQY 303
FA N TE+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = -3
Query: 437 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 270
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 15 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 74
Query: 269 KIDLHVAK--QSTLWATTGRRT 210
+++ + W G +T
Sbjct: 75 NVEIEYPECLNKMKWIKNGWKT 96
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = -3
Query: 437 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 270
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 7 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 66
Query: 269 KIDLHVAK--QSTLWATTGRRT 210
+++ + W G +T
Sbjct: 67 NVEIEYPECLNKMKWIKNGWKT 88
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = -3
Query: 437 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 270
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 15 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 74
Query: 269 KIDLHVAK--QSTLWATTGRRT 210
+++ + W G +T
Sbjct: 75 NVEIEYPECLNKMKWIKNGWKT 96
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = -3
Query: 437 TGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDK 270
+ ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 15 SAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPS 74
Query: 269 KIDLHVAK--QSTLWATTGRRT 210
+++ + W G +T
Sbjct: 75 NVEIEYPECLNKMKWIKNGWKT 96
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -1
Query: 430 TSRLSTPFIIHLPKEAMTTSC-TPRR-TTKKFASSTFMRRHSSNTSSKVTSRPSTKKLIC 257
TS + P AM+TS TP TT + S+TF S++TSS T++ S+ +
Sbjct: 291 TSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITS 350
Query: 256 T*QSSQL 236
+ S+ L
Sbjct: 351 SPSSTTL 357
Score = 26.6 bits (56), Expect = 9.5
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -1
Query: 469 SEQTDTKQQDELATSRLSTPFIIHLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 290
+E+ T TS ST P +TTS TT+ S+ +S +S V
Sbjct: 404 TEEPSTSTTTTEVTSTSSTVTTTE-PTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTV 462
Query: 289 TSRPSTKKLICT*QSSQ 239
TS S+ + T S++
Sbjct: 463 TSSSSSSTTVTTPTSTE 479
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -1
Query: 430 TSRLSTPFIIHLPKEAMTTSC-TPRR-TTKKFASSTFMRRHSSNTSSKVTSRPSTKKLIC 257
TS + P AM+TS TP TT + S+TF S++TSS T++ S+ +
Sbjct: 291 TSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITS 350
Query: 256 T*QSSQL 236
+ S+ L
Sbjct: 351 SPSSTTL 357
Score = 26.6 bits (56), Expect = 9.5
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -1
Query: 469 SEQTDTKQQDELATSRLSTPFIIHLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKV 290
+E+ T TS ST P +TTS TT+ S+ +S +S V
Sbjct: 404 TEEPSTSTTTTEVTSTSSTVTTTE-PTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTV 462
Query: 289 TSRPSTKKLICT*QSSQ 239
TS S+ + T S++
Sbjct: 463 TSSSSSSTTVTTPTSTE 479
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -1
Query: 460 TDTKQQDELATSRLSTPFIIHLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSSKVTSR 281
T T Q T+ +TP TT+ T +TTK ++T + +++T + T+
Sbjct: 260 TTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTK-TTSTPTTTTTT 318
Query: 280 PST 272
P T
Sbjct: 319 PKT 321
>Z68338-5|CAA92758.1| 203|Caenorhabditis elegans Hypothetical
protein T24B8.6 protein.
Length = 203
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 361 RRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICT*QSSQ 239
+R ++KF+ S M +S+T S T PS+ K T Q+ Q
Sbjct: 22 QRQSEKFSPSMNMTASTSSTPSTSTKIPSSSKSSVTKQTKQ 62
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 49 VEGWVPGRSLVEVKSTRNKCVLVERLRSSTKY 144
+E W+PGR L S+ + C + R KY
Sbjct: 345 IEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY 376
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 49 VEGWVPGRSLVEVKSTRNKCVLVERLRSSTKY 144
+E W+PGR L S+ + C + R KY
Sbjct: 345 IEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY 376
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 379 TTSCTPRRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICT 254
TT+ TP RTT+ + T +S ++ + T++P T I T
Sbjct: 158 TTTVTP-RTTRSSTARTVATTKTSPSTLRTTTKPPTTTTIAT 198
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -3
Query: 431 YLPPFNSFYYPFAQRSNDYELHTEKNYEEIRFLDIYEKTFFQYLQQGH-FKAFDKKIDL 258
Y+PP ++ + S Y N E +F YEK +F L K DK I +
Sbjct: 143 YIPPGWDEWHAIVKNSKFYNYTMNSNGEREKFGSEYEKDYFTDLVTNRSLKFIDKHIKI 201
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 183 QFYQRSYEVNARRVLGAAPKPFNQ 112
Q Y R VNA + G P PF+Q
Sbjct: 179 QLYSRCLPVNAEKWFGHRPNPFSQ 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,938,506
Number of Sequences: 27780
Number of extensions: 180582
Number of successful extensions: 706
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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