Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0778
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          67   8e-14
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      67   8e-14
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          60   2e-11
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      57   1e-10
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          52   2e-09
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      52   2e-09
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    51   6e-09
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          47   9e-08
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.57 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.57 
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   7.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 67.3 bits (157), Expect = 8e-14
 Identities = 31/83 (37%), Positives = 51/83 (61%)
 Frame = -2

Query: 249 KAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTS 70
           K +N +GN  + NAD +  +F      S +  AR++LG   +  ++Y  +PSAL+ + TS
Sbjct: 357 KGLNILGNIIEGNADSYNTEFYG----SIDTLARKILGYNLEAASKYQIVPSALEIFSTS 412

Query: 69  ARDPAFYQLYKRIVQYIIEFKQY 1
            +DPAFY++YKRI+ Y   +K +
Sbjct: 413 MKDPAFYRIYKRIIDYYHSYKMH 435


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 67.3 bits (157), Expect = 8e-14
 Identities = 31/83 (37%), Positives = 51/83 (61%)
 Frame = -2

Query: 249 KAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTS 70
           K +N +GN  + NAD +  +F      S +  AR++LG   +  ++Y  +PSAL+ + TS
Sbjct: 357 KGLNILGNIIEGNADSYNTEFYG----SIDTLARKILGYNLEAASKYQIVPSALEIFSTS 412

Query: 69  ARDPAFYQLYKRIVQYIIEFKQY 1
            +DPAFY++YKRI+ Y   +K +
Sbjct: 413 MKDPAFYRIYKRIIDYYHSYKMH 435


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 59.7 bits (138), Expect = 2e-11
 Identities = 31/82 (37%), Positives = 46/82 (56%)
 Frame = -2

Query: 249 KAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTS 70
           + +N +GN  + N+D     F   Y    ++ AR +LG      N+   IPSAL  Y TS
Sbjct: 359 EGLNMLGNVIEGNSDSINTKFYGMY----DILARDILGYNFDFQNKNNLIPSALQSYSTS 414

Query: 69  ARDPAFYQLYKRIVQYIIEFKQ 4
            RDPAFY LY++I+ Y + +K+
Sbjct: 415 MRDPAFYMLYQKILSYFLRYKK 436


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 56.8 bits (131), Expect = 1e-10
 Identities = 30/82 (36%), Positives = 45/82 (54%)
 Frame = -2

Query: 249 KAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTS 70
           + +N +GN  + ++D     F   Y    ++ AR +LG      N+   IPSAL  Y TS
Sbjct: 359 EGLNMLGNVIEGSSDSINTKFYGMY----DILARDILGYNFDFQNKNNLIPSALQSYSTS 414

Query: 69  ARDPAFYQLYKRIVQYIIEFKQ 4
            RDPAFY LY+ I+ Y + +K+
Sbjct: 415 MRDPAFYMLYQNILSYFLRYKK 436


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = -2

Query: 249 KAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTS 70
           + +N +GN  Q N D      +Q Y +  ++  R+VLG   +   +Y  +PSAL  + TS
Sbjct: 356 QGLNVLGNIVQGNGDSVN---VQLYGQ-LDLLVRKVLGFGYESNVKYQVVPSALQMWSTS 411

Query: 69  ARDPAFYQLYKRIVQYIIEFKQ 4
            RDP F+ +YK I+ Y  ++K+
Sbjct: 412 LRDPVFFSIYKTILDYYHKYKE 433


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = -2

Query: 249 KAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTS 70
           + +N +GN  Q N D      +Q Y +  ++  R+VLG   +   +Y  +PSAL  + TS
Sbjct: 356 QGLNVLGNIVQGNGDSVN---VQLYGQ-LDLLVRKVLGFGYESNVKYQVVPSALQMWSTS 411

Query: 69  ARDPAFYQLYKRIVQYIIEFKQ 4
            RDP F+ +YK I+ Y  ++K+
Sbjct: 412 LRDPVFFSIYKTILDYYHKYKE 433


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 51.2 bits (117), Expect = 6e-09
 Identities = 21/58 (36%), Positives = 37/58 (63%)
 Frame = -2

Query: 177 YQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTSARDPAFYQLYKRIVQYIIEFKQ 4
           Y  S +  AR++LG AP+  N + + PS+L+  + +  DP FYQLYK+++    +++Q
Sbjct: 393 YYGSLQAAARKLLGNAPEVENIWDYTPSSLELGEVAVHDPVFYQLYKKVMNLYQQYQQ 450


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 47.2 bits (107), Expect = 9e-08
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = -2

Query: 150 RRVLGAAPKPFNQYTFIPSALDFYQTSARDPAFYQLYKRIVQYIIEFKQ 4
           R+VLG   +   +Y  +PSAL  + TS RDP F+ +YK I+ Y  ++K+
Sbjct: 11  RKVLGFGYESNVKYQVVPSALQMWSTSLRDPVFFSIYKTILDYYHKYKE 59


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 252 SKAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQ 112
           S AVN +        +LF   F +F Q S      +VLGA P+ F Q
Sbjct: 53  SAAVNRLNIPANEILELFGRMFFEFCQDSGYDKILQVLGATPRDFLQ 99


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 252 SKAVNFVGNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQ 112
           S AVN +        +LF   F +F Q S      +VLGA P+ F Q
Sbjct: 53  SAAVNRLNIPANEILELFGRMFFEFCQDSGYDKILQVLGATPRDFLQ 99


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -2

Query: 474 NVVNKLIRNNKMNWLPPAFQLLLLSICPKKQ*LRVAHREE 355
           N++N+++  N    +  +  L    IC +++   V HR+E
Sbjct: 145 NLINQMLTVNPSKRITASEALKHPWICQRERVASVVHRQE 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,797
Number of Sequences: 438
Number of extensions: 2322
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)