Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0774
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573     27   9.9  
07_01_0012 + 87484-87654,88162-88307,88622-88837,88913-89014,891...    27   9.9  
05_06_0152 - 26008495-26009074,26010555-26011361,26016536-260166...    27   9.9  

>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
          Length = 409

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 338 TELNESNIKQNNEPNNTRSVAN 273
           T  N SNI  NN  NN  S++N
Sbjct: 195 TTCNNSNISSNNNNNNINSISN 216


>07_01_0012 +
           87484-87654,88162-88307,88622-88837,88913-89014,
           89134-89206
          Length = 235

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 120 KVKLVTKSNFVEQKNRCLSFLIYFKIGVSMIVTV 19
           K K+  KSN  + +NRC+  L+ + + V++ +T+
Sbjct: 53  KYKIQKKSNTPDYQNRCVVRLVLYHVCVNLPLTI 86


>05_06_0152 -
           26008495-26009074,26010555-26011361,26016536-26016657,
           26016860-26017462
          Length = 703

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -3

Query: 401 VG*DQGRGCGDGEAGAPYREATELN----ESNIKQNNEPN 294
           VG DQG  CG G+      E  E N    E  +K+ +EPN
Sbjct: 647 VGGDQGWQCGGGDERGGGMEREEKNRREGEEGLKKGSEPN 686


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,550,631
Number of Sequences: 37544
Number of extensions: 239014
Number of successful extensions: 531
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)