Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0774
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001583-1|AAN71338.1|  894|Drosophila melanogaster RE25924p pro...    30   2.4  
U43733-1|AAA86639.1|  904|Drosophila melanogaster Abrupt protein.      30   3.2  
AE014134-2051|AAN10774.1|  894|Drosophila melanogaster CG4807-PB...    30   3.2  
AE014134-2050|AAF53087.2|  904|Drosophila melanogaster CG4807-PA...    30   3.2  

>BT001583-1|AAN71338.1|  894|Drosophila melanogaster RE25924p
           protein.
          Length = 894

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 23/86 (26%), Positives = 37/86 (43%)
 Frame = -3

Query: 389 QGRGCGDGEAGAPYREATELNESNIKQNNEPNNTRSVAN*LIALLHETNTK*VYNEWIYK 210
           Q RG  D   G PY +A     S+   NN  NN  S +N  ++  +  N     +    K
Sbjct: 182 QIRGLADVNGGYPYSKALSAALSHNSSNN--NNNNSSSNNSLSNNNNNNNNNAESSNHNK 239

Query: 209 IQNYMYHEPSTVTSNYNSYTDEVNAS 132
           I +Y+    ++   N +S ++  N S
Sbjct: 240 ISSYLSPNQTSAACNNSSNSNSNNPS 265


>U43733-1|AAA86639.1|  904|Drosophila melanogaster Abrupt protein.
          Length = 904

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 23/86 (26%), Positives = 37/86 (43%)
 Frame = -3

Query: 389 QGRGCGDGEAGAPYREATELNESNIKQNNEPNNTRSVAN*LIALLHETNTK*VYNEWIYK 210
           Q RG  D   G PY +A     S+   NN  NN  S +N  ++  +  N     +    K
Sbjct: 182 QIRGLADVNGGYPYSKALSAALSHNSSNN--NNNNSSSNNSLSNNNNNNNNNAESSNHNK 239

Query: 209 IQNYMYHEPSTVTSNYNSYTDEVNAS 132
           I +Y+    ++   N +S ++  N S
Sbjct: 240 ISSYLSPNQTSAACNNSSNSNSNNHS 265


>AE014134-2051|AAN10774.1|  894|Drosophila melanogaster CG4807-PB,
           isoform B protein.
          Length = 894

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 23/86 (26%), Positives = 37/86 (43%)
 Frame = -3

Query: 389 QGRGCGDGEAGAPYREATELNESNIKQNNEPNNTRSVAN*LIALLHETNTK*VYNEWIYK 210
           Q RG  D   G PY +A     S+   NN  NN  S +N  ++  +  N     +    K
Sbjct: 182 QIRGLADVNGGYPYSKALSAALSHNSSNN--NNNNSSSNNSLSNNNNNNNNNAESSNHNK 239

Query: 209 IQNYMYHEPSTVTSNYNSYTDEVNAS 132
           I +Y+    ++   N +S ++  N S
Sbjct: 240 ISSYLSPNQTSAACNNSSNSNSNNHS 265


>AE014134-2050|AAF53087.2|  904|Drosophila melanogaster CG4807-PA,
           isoform A protein.
          Length = 904

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 23/86 (26%), Positives = 37/86 (43%)
 Frame = -3

Query: 389 QGRGCGDGEAGAPYREATELNESNIKQNNEPNNTRSVAN*LIALLHETNTK*VYNEWIYK 210
           Q RG  D   G PY +A     S+   NN  NN  S +N  ++  +  N     +    K
Sbjct: 182 QIRGLADVNGGYPYSKALSAALSHNSSNN--NNNNSSSNNSLSNNNNNNNNNAESSNHNK 239

Query: 209 IQNYMYHEPSTVTSNYNSYTDEVNAS 132
           I +Y+    ++   N +S ++  N S
Sbjct: 240 ISSYLSPNQTSAACNNSSNSNSNNHS 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,111,392
Number of Sequences: 53049
Number of extensions: 451897
Number of successful extensions: 873
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)