Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0770
         (373 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0008 + 8901817-8902146,8903058-8903120,8903226-8903321,890...    35   0.018
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492...    29   1.5  
01_05_0579 + 23393632-23393734,23393765-23394513,23395958-233963...    27   3.6  
06_03_0123 - 16924074-16926089                                         26   8.2  
05_03_0533 + 15117535-15118248                                         26   8.2  

>11_03_0008 +
           8901817-8902146,8903058-8903120,8903226-8903321,
           8903924-8903971,8904558-8904629,8905373-8905431,
           8905582-8905672,8905749-8905886
          Length = 298

 Score = 35.1 bits (77), Expect = 0.018
 Identities = 21/65 (32%), Positives = 34/65 (52%)
 Frame = -2

Query: 231 QPLKQATNEYKLNSKFYLRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWM 52
           +P+K  + ++  NS   L+  EQAP   T S++ ++        +      +SF AKYWM
Sbjct: 199 RPVKMPS-KWVFNSYTVLKTSEQAP--RTPSFVDQLIEAENGLGEVVKSPEKSFWAKYWM 255

Query: 51  YIVVL 37
           YI+ L
Sbjct: 256 YIIPL 260


>05_07_0093 -
           27648656-27648736,27649034-27649147,27649229-27649288,
           27649464-27649687,27649799-27649886,27650326-27650532,
           27650566-27650784,27650903-27651001,27651439-27651504,
           27651654-27651737,27651829-27651888,27652041-27652325,
           27652789-27652836,27652988-27653034,27653442-27653556,
           27653958-27654032,27654227-27654298,27654944-27656124,
           27656613-27656757
          Length = 1089

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
 Frame = -2

Query: 249 QVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPD-TASYIQKMERDREAREKGEMKD--- 82
           Q++ S +  +Q  +E +     YL   E+A + +  A  +++  ++   R K E++D   
Sbjct: 769 QLSRSLEKERQRASESRQE---YLAIKEEAAMQEGRAKQLEEEIKELRTRHKKELQDAAE 825

Query: 81  NRSFLAKY--WMYIVVLI 34
           +R  L K   WMY++VLI
Sbjct: 826 HRELLEKEKSWMYVIVLI 843


>01_05_0579 +
           23393632-23393734,23393765-23394513,23395958-23396315,
           23396830-23396852
          Length = 410

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 29  SSIKTTIYIQYLAKNDLLSFISPFSRASLSRSIFCIYDAVSGT 157
           SSIK  ++  +  KN  ++FI+  +   L     CI+ +  GT
Sbjct: 311 SSIKKVVFHGFSWKNSEIAFINSIAEGGLVLGKICIFQSRHGT 353


>06_03_0123 - 16924074-16926089
          Length = 671

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +2

Query: 44  TIYIQYLAKNDLLSFISPFSRASLSRSIFCIYDAVSGTGACS 169
           T Y+Q     + L F     R  L  SIFCI   +    A S
Sbjct: 383 TCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATS 424


>05_03_0533 + 15117535-15118248
          Length = 237

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -2

Query: 159 PVPDTASYIQKMERDREAREKGEMKDN--RSF 70
           P P+T +Y++ + R R  R +GE ++   RSF
Sbjct: 130 PSPETPAYVKMVARLRSRRRRGEEEEGPCRSF 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,486,617
Number of Sequences: 37544
Number of extensions: 141141
Number of successful extensions: 356
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)