Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0770
         (373 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   3.7  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   8.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 206  SISSILNST*DILSKLQFPILRHIYKKWNVTER 108
            S++  L S  D L K+Q P ++ + K   VTE+
Sbjct: 1005 SLAKELQSKLDTLEKIQTPNMKAMQKLDRVTEK 1037


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 197 SILNST*DILSKLQFPILRHIYKKWNV 117
           S+LN+   +LSK+  P L  I  KW +
Sbjct: 523 SLLNTDYKLLSKVIKPRLDCIIGKWGI 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,504
Number of Sequences: 2352
Number of extensions: 5567
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28374390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)