Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0770
(373 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-7|CAA21610.1| 236|Caenorhabditis elegans Hypothetical ... 66 1e-11
Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical pr... 31 0.26
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 27 3.2
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 27 3.2
Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical pr... 26 7.5
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 26 7.5
AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical ... 26 7.5
Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical pr... 26 9.9
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 26 9.9
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 26 9.9
AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical ... 26 9.9
AF025472-2|AAB71074.2| 625|Caenorhabditis elegans Hypothetical ... 26 9.9
AF025472-1|AAY43980.1| 832|Caenorhabditis elegans Hypothetical ... 26 9.9
AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 26 9.9
>AL032637-7|CAA21610.1| 236|Caenorhabditis elegans Hypothetical
protein Y43F8C.7 protein.
Length = 236
Score = 65.7 bits (153), Expect = 1e-11
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = -2
Query: 159 PVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVVLI 34
P PDTA+++QKMER++ A++ G DNRSFLAKYWMYIV ++
Sbjct: 175 PTPDTAAFVQKMEREKRAKQHGADADNRSFLAKYWMYIVPVV 216
>Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.10 protein.
Length = 679
Score = 31.1 bits (67), Expect = 0.26
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 69 RMTCYPSFLPFHVPLCHVPFFVYMTQYRELELAQYILS 182
R+ Y + + + L H P +VY+ Y E +LA Y+L+
Sbjct: 310 RVLVYTGDISYSLYLVHWPIYVYVKHYYENQLAAYLLA 347
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 288 CIDNIRETIFQKCLSFN 338
CID+I ET+FQ C +FN
Sbjct: 106 CIDDI-ETVFQNCYTFN 121
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 288 CIDNIRETIFQKCLSFN 338
CID+I ET+FQ C +FN
Sbjct: 106 CIDDI-ETVFQNCYTFN 121
>Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical
protein T06G6.2 protein.
Length = 339
Score = 26.2 bits (55), Expect = 7.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 30 LQLKQQYTSNI*LRMTCYPSFLPFHVPLCHVPFFV-YMTQY 149
++++Q Y S + P LPFH C V FV Y+T Y
Sbjct: 84 IRIRQIYRSIV---FASEPCRLPFHFTECEVELFVYYLTTY 121
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily assigned
gene nameprotein 59 protein.
Length = 1592
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/59 (18%), Positives = 30/59 (50%)
Frame = -2
Query: 237 STQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAK 61
+T + +++EY +SKFY ++ + + ++ + + + ++ D ++FL K
Sbjct: 1113 TTTQILNSSSEYSSSSKFYTLFMAETE-EEKRKWVVALSELKTLLRRSKLADRKAFLVK 1170
>AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical
protein M116.4 protein.
Length = 329
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 222 KQATNEYKLNSKFYLRYIEQAPVPDTASYIQK 127
K++TN Y L +LR+I+ DT +I +
Sbjct: 71 KRSTNFYLLTDTTFLRFIDSQKTIDTTQWINQ 102
>Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.4 protein.
Length = 339
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 30 LQLKQQYTSNI*LRMTCYPSFLPFHVPLCHVP-FFVYMTQY 149
++++Q Y S + + P LPFH C V +F Y+T Y
Sbjct: 84 IRIRQVYRSFV---YSSEPCRLPFHFTDCEVELYFYYLTNY 121
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 275 NGAVIAVISKLLTLRNH*SKPLMSISSILNST*DILSKLQFPILRHIYK 129
NG+V+ ++ LL +H PL+ + ++ S L +P + IYK
Sbjct: 2147 NGSVLHMLFLLLQHNHHSISPLLINAQVIRSVSRFLQGNNWPDVSKIYK 2195
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 275 NGAVIAVISKLLTLRNH*SKPLMSISSILNST*DILSKLQFPILRHIYK 129
NG+V+ ++ LL +H PL+ + ++ S L +P + IYK
Sbjct: 2175 NGSVLHMLFLLLQHNHHSISPLLINAQVIRSVSRFLQGNNWPDVSKIYK 2223
>AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical
protein Y54G11A.2 protein.
Length = 210
Score = 25.8 bits (54), Expect = 9.9
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = -2
Query: 258 SHFQVANSTQPLK--QATNEY-KLNSKFYLRYIEQAPVPDTASY--IQKMERDREAREKG 94
SH QV ++ P K + N K K + Y E+ D ++K+E++R+ REK
Sbjct: 112 SHKQVKHTVVPTKINEIVNRLEKTRRKDDIDYKEERDARDAKERQKLKKLEQERKDREKK 171
Query: 93 EM 88
EM
Sbjct: 172 EM 173
>AF025472-2|AAB71074.2| 625|Caenorhabditis elegans Hypothetical
protein ZK250.5a protein.
Length = 625
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 2 NRIHLHLRVSSIKTTIYIQ--YLAKNDLLSFISPFSRASLSRSIF 130
+++ + + S+K +Y++ +L ++ L F + FS+ ++ SIF
Sbjct: 528 SKVDIRITSISLKDVLYLKKKFLLSSNFLQFKAKFSKTNVDDSIF 572
>AF025472-1|AAY43980.1| 832|Caenorhabditis elegans Hypothetical
protein ZK250.5b protein.
Length = 832
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 2 NRIHLHLRVSSIKTTIYIQ--YLAKNDLLSFISPFSRASLSRSIF 130
+++ + + S+K +Y++ +L ++ L F + FS+ ++ SIF
Sbjct: 735 SKVDIRITSISLKDVLYLKKKFLLSSNFLQFKAKFSKTNVDDSIF 779
>AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical
protein Y71F9AL.9 protein.
Length = 314
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 326 AFLENGLSDVINAWILPNGAVIAVISK 246
AFLE+G S ++ W +G + K
Sbjct: 47 AFLEDGASSILGGWTTSDGVSVTAAKK 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,762,428
Number of Sequences: 27780
Number of extensions: 137193
Number of successful extensions: 334
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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