Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0758
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067773-1|AAH67773.1| 434|Homo sapiens arginine/serine-rich co... 32 2.6
BC008684-1|AAH08684.2| 434|Homo sapiens arginine/serine-rich co... 32 2.6
AB212664-1|BAE93762.1| 434|Homo sapiens hypothetical protein pr... 32 2.6
BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein. 31 3.5
BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein. 31 3.5
AK026107-1|BAB15362.1| 430|Homo sapiens protein ( Homo sapiens ... 31 3.5
AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein. 31 3.5
AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2 pro... 31 3.5
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 8.1
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 8.1
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 8.1
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 8.1
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 8.1
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 8.1
>BC067773-1|AAH67773.1| 434|Homo sapiens arginine/serine-rich
coiled-coil 2 protein.
Length = 434
Score = 31.9 bits (69), Expect = 2.6
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -2
Query: 314 RSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQH 135
+SE ++ +S R+RL G D R++ SSR SR+ E R+ R+
Sbjct: 84 KSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRS-RER 142
Query: 134 LNARKRTPERKR 99
+R R+ ERK+
Sbjct: 143 KKSRSRSRERKK 154
>BC008684-1|AAH08684.2| 434|Homo sapiens arginine/serine-rich
coiled-coil 2 protein.
Length = 434
Score = 31.9 bits (69), Expect = 2.6
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -2
Query: 314 RSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQH 135
+SE ++ +S R+RL G D R++ SSR SR+ E R+ R+
Sbjct: 84 KSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRS-RER 142
Query: 134 LNARKRTPERKR 99
+R R+ ERK+
Sbjct: 143 KKSRSRSRERKK 154
>AB212664-1|BAE93762.1| 434|Homo sapiens hypothetical protein
protein.
Length = 434
Score = 31.9 bits (69), Expect = 2.6
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -2
Query: 314 RSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQH 135
+SE ++ +S R+RL G D R++ SSR SR+ E R+ R+
Sbjct: 84 KSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRS-RER 142
Query: 134 LNARKRTPERKR 99
+R R+ ERK+
Sbjct: 143 KKSRSRSRERKK 154
>BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R RD ++D RSR + ER + R+ R+R ER+R
Sbjct: 353 RDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERER 409
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R + R+ SRD +R R E ER + R+ R+R ER+R
Sbjct: 363 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERER 419
>BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R RD ++D RSR + ER + R+ R+R ER+R
Sbjct: 353 RDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERER 409
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R + R+ SRD +R R E ER + R+ R+R ER+R
Sbjct: 363 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERER 419
>AK026107-1|BAB15362.1| 430|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22454 fis, clone HRC09703. ).
Length = 430
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R RD ++D RSR + ER + R+ R+R ER+R
Sbjct: 357 RDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERER 413
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R + R+ SRD +R R E ER + R+ R+R ER+R
Sbjct: 367 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERER 423
>AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein.
Length = 735
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R RD ++D RSR + ER + R+ R+R ER+R
Sbjct: 249 RDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERER 305
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R + R+ SRD +R R E ER + R+ R+R ER+R
Sbjct: 259 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERER 315
>AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2
protein.
Length = 784
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R RD ++D RSR + ER + R+ R+R ER+R
Sbjct: 298 RDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERER 354
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R + R+ SRD +R R E ER + R+ R+R ER+R
Sbjct: 308 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERER 364
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
R R + R R R + T +R RSRT PT RT + +R RTP R+R
Sbjct: 570 RGRSRSRTPARRGRSRSR-TPARRRSRSRT-PTRRRSRSRTPARRGRSRSRTPARRR 624
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
R R + R R R + T +R RSRT PT RT + +R RTP R+R
Sbjct: 570 RGRSRSRTPARRGRSRSR-TPARRRSRSRT-PTRRRSRSRTPARRGRSRSRTPARRR 624
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
R R + R R R + T +R RSRT PT RT + +R RTP R+R
Sbjct: 570 RGRSRSRTPARRGRSRSR-TPARRRSRSRT-PTRRRSRSRTPARRGRSRSRTPARRR 624
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
R R + R R R + T +R RSRT PT RT + +R RTP R+R
Sbjct: 535 RGRSRSRTPARRGRSRSR-TPARRRSRSRT-PTRRRSRSRTPARRGRSRSRTPARRR 589
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
R R + R R R + T +R RSRT PT RT + +R RTP R+R
Sbjct: 360 RGRSRSRTPARRGRSRSR-TPARRRSRSRT-PTRRRSRSRTPARRGRSRSRTPARRR 414
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
R R + R R R + T +R RSRT PT RT + +R RTP R+R
Sbjct: 618 RGRSRSRTPARRGRSRSR-TPARRRSRSRT-PTRRRSRSRTPARRGRSRSRTPARRR 672
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,749,819
Number of Sequences: 237096
Number of extensions: 1650997
Number of successful extensions: 3781
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3748
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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