Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0758
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 33 0.17
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 33 0.23
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.53
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 31 0.92
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 31 0.92
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 31 1.2
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 31 1.2
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 29 2.8
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 6.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 6.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 8.6
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = -2
Query: 329 DRNDTRSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKR 150
DR+ RS + RDR + R R R + RD KRSR+ R+K
Sbjct: 300 DRDRRRSRDRRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS-RDRRRRSKS 358
Query: 149 TFRQHLNARKRTPERKR 99
R+ +R R+ +RKR
Sbjct: 359 RDRKRERSRSRSKDRKR 375
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = -2
Query: 329 DRNDTRSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKR 150
DR+ RS + RDR + R R R + RD KRSR+ R+K
Sbjct: 300 DRDRRRSRDRRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRS-RDRRRRSKS 358
Query: 149 TFRQHLNARKRTPERKR 99
R+ +R R+ +RKR
Sbjct: 359 RDRKRERSRSRSKDRKR 375
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
+D+ KPR R ++ R+ R+ +R R E+ R +R + R+R+PER+R
Sbjct: 262 KDQRKPREDRRRSVERQ---DQREDRRDRRRSPEDPRERRRSPEDRTVRRRSPERRR 315
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 269 RDRLKPRRTG--RDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR +PRR+ R + R++ SR R R P ER + R R R+ R+R
Sbjct: 424 RDRRRPRRSNSRRRSRSRDRQRRSRSRDRRRYSPDRRERRRSRSRDRRRHRSRSTSRRR 482
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -2
Query: 323 NDTRSERVLNE*NSYGLPRDRLKPRRTGRD-ALLREKCTSSRDVKRSRTVPTENERTKRT 147
+D+++ R + NS R R + RR R + R K S KRSR R++
Sbjct: 199 DDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSR 258
Query: 146 FRQHLNARKRTPER 105
R N + R+P R
Sbjct: 259 SRSADNRKSRSPSR 272
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 31.1 bits (67), Expect = 0.92
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -2
Query: 272 PRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
PRDR R+ G+ + R + S RD +R R ER + R + R+R ER+R
Sbjct: 149 PRDR--DRKRGKRSRSRSRERSYRDDRRDRKRSRSRERRRSPPRGTTSDRRRDDERRR 204
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 31.1 bits (67), Expect = 0.92
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -2
Query: 272 PRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
PRDR R+ G+ + R + S RD +R R ER + R + R+R ER+R
Sbjct: 275 PRDR--DRKRGKRSRSRSRERSYRDDRRDRKRSRSRERRRSPPRGTTSDRRRDDERRR 330
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 266 DRLKPRRTGRDALL-REKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR*IS 90
D RR +D+ R + R RSR+V +N + ++ N R+R+P R R S
Sbjct: 1113 DNYFSRRPNKDSYRDRRRFNGRRSRSRSRSVSPQNYKRRKLDEHDNNHRQRSPIRDRHTS 1172
Query: 89 P 87
P
Sbjct: 1173 P 1173
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 266 DRLKPRRTGRDALL-REKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR*IS 90
D RR +D+ R + R RSR+V +N + ++ N R+R+P R R S
Sbjct: 1127 DNYFSRRPNKDSYRDRRRFNGRRSRSRSRSVSPQNYKRRKLDEHDNNHRQRSPIRDRHTS 1186
Query: 89 P 87
P
Sbjct: 1187 P 1187
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
+++ K R+ + R++ SS D +R R E+ R R+ H R+R+PER R
Sbjct: 231 KEKDKNRKKEKTERKRKRSHSSSD-RRGRRTSKESRRRSRSRDTH-RTRRRSPERSR 285
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -2
Query: 329 DRNDTRSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKR 150
DR + R ER + DR K R D REK ++ +R R + K+
Sbjct: 1083 DRREDRKERDRDRDRDRDRDEDREKVRDK-EDKAQREKDKKEKERERRRQRDRDRTEQKK 1141
Query: 149 TFRQHLNARKRTPERK 102
+ R+ ++KR E+K
Sbjct: 1142 SDREKEPSKKRKLEKK 1157
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -2
Query: 329 DRNDTRSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKR 150
DR + R ER + DR K R D REK ++ +R R + K+
Sbjct: 1083 DRREDRKERDRDRDRDRDRDEDREKVRDK-EDKAQREKDKKEKERERRRQRDRDRTEQKK 1141
Query: 149 TFRQHLNARKRTPERK 102
+ R+ ++KR E+K
Sbjct: 1142 SDREKEPSKKRKLEKK 1157
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 269 RDRLKPRRTGRDALLREKCTS--SRDVKRSRTVPTENERTKRTFRQHLNARKRTPERKR 99
RDR + R RD R+ +S S+D+K S + + + +R R+ + RK+ KR
Sbjct: 551 RDRDRDRERDRDRSHRDVRSSGRSKDIKASSSHRRDRDDARRKDRRRDDVRKKERREKR 609
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = -2
Query: 323 NDTRSERVLNE*NSYGLPRDRLKPRRTGRDALLREKCTSSRDVKRSRTVPTENERTKRTF 144
+D R +R L+ N R+R + R RD RE+ S +RSR+ + R +
Sbjct: 69 SDDRRDRGLDRGNDRDRDRERERDRDRRRDR--RERSGSRDRRRRSRSRDRDGGRRRDRS 126
Query: 143 RQHLNARKRTPERKR 99
R + R R +RKR
Sbjct: 127 RSR-DRRDRNDDRKR 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,565,064
Number of Sequences: 27780
Number of extensions: 302002
Number of successful extensions: 829
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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