Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0706
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004833-1|AAO45189.1|  242|Drosophila melanogaster RH57257p pro...    42   2e-04
AY071679-1|AAL49301.1|  242|Drosophila melanogaster RH08058p pro...    42   2e-04
AE014298-2782|AAF48896.1|  242|Drosophila melanogaster CG7322-PA...    42   2e-04
AE014134-774|AAF50980.1|  325|Drosophila melanogaster CG15629-PA...    33   0.14 
AY069373-1|AAL39518.1|  336|Drosophila melanogaster LD07939p pro...    28   4.1  
AE014297-3751|AAF56432.1|  336|Drosophila melanogaster CG10425-P...    28   4.1  

>BT004833-1|AAO45189.1|  242|Drosophila melanogaster RH57257p
           protein.
          Length = 242

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +3

Query: 258 VDVDIGDWEKTRKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           + +D+  W+  R+ +  +   D LVNNA VA+ +PF + +  +FD  FDV
Sbjct: 58  LQLDLSGWQAVREGLAKVPLLDGLVNNAGVAIIKPFEELTEQDFDTHFDV 107


>AY071679-1|AAL49301.1|  242|Drosophila melanogaster RH08058p
           protein.
          Length = 242

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +3

Query: 258 VDVDIGDWEKTRKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           + +D+  W+  R+ +  +   D LVNNA VA+ +PF + +  +FD  FDV
Sbjct: 58  LQLDLSGWQAVREGLAKVPLLDGLVNNAGVAIIKPFEELTEQDFDTHFDV 107


>AE014298-2782|AAF48896.1|  242|Drosophila melanogaster CG7322-PA
           protein.
          Length = 242

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +3

Query: 258 VDVDIGDWEKTRKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           + +D+  W+  R+ +  +   D LVNNA VA+ +PF + +  +FD  FDV
Sbjct: 58  LQLDLSGWQAVREGLAKVPLLDGLVNNAGVAIIKPFEELTEQDFDTHFDV 107


>AE014134-774|AAF50980.1|  325|Drosophila melanogaster CG15629-PA
           protein.
          Length = 325

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 264 VDIGD----WEKTRKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           VDI D    +++  +V   +G  D L+NNA +  C+PF +        T+++
Sbjct: 113 VDISDREQIYQRASQVTEEVGPVDILINNAGIVCCKPFWELHDRVIQNTYNI 164


>AY069373-1|AAL39518.1|  336|Drosophila melanogaster LD07939p
           protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = +3

Query: 249 YRIVDVDIGDWEKTRKVVX----SLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           YR +D+  GD+++  KV+     S G    L+N A +A+C  F + S  +  K  +V
Sbjct: 92  YRSLDIS-GDYDQVAKVLGEIEDSFGPIYTLINCAGMAICGVFEEVSVQDVHKLMNV 147


>AE014297-3751|AAF56432.1|  336|Drosophila melanogaster CG10425-PA
           protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = +3

Query: 249 YRIVDVDIGDWEKTRKVVX----SLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           YR +D+  GD+++  KV+     S G    L+N A +A+C  F + S  +  K  +V
Sbjct: 92  YRSLDIS-GDYDQVAKVLGEIEDSFGPIYTLINCAGMAICGVFEEVSVQDVHKLMNV 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,062
Number of Sequences: 53049
Number of extensions: 267914
Number of successful extensions: 735
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)