Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0706
         (407 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81586-8|CAB04694.2|  305|Caenorhabditis elegans Hypothetical pr...    36   0.015
Z75547-15|CAA99897.2|  251|Caenorhabditis elegans Hypothetical p...    32   0.18 
Z75527-10|CAJ80819.1|  251|Caenorhabditis elegans Hypothetical p...    32   0.18 
Z74042-10|CAA98524.1|  307|Caenorhabditis elegans Hypothetical p...    28   2.3  
Z68337-4|CAA92744.1|  364|Caenorhabditis elegans Hypothetical pr...    28   3.0  
AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical ...    28   3.0  
AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical ...    28   3.0  
AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical ...    28   3.0  
Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical p...    27   5.2  
Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical p...    27   5.2  
Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z93393-6|CAB07691.2|  495|Caenorhabditis elegans Hypothetical pr...    27   6.9  

>Z81586-8|CAB04694.2|  305|Caenorhabditis elegans Hypothetical
           protein T05F1.10 protein.
          Length = 305

 Score = 35.5 bits (78), Expect = 0.015
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 291 RKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           ++V+  +G  D LVNNA +A  +  LD S    +++FDV
Sbjct: 109 QQVINDIGKVDILVNNAGIATAKMILDSSENEINRSFDV 147


>Z75547-15|CAA99897.2|  251|Caenorhabditis elegans Hypothetical
           protein R11D1.11 protein.
          Length = 251

 Score = 31.9 bits (69), Expect = 0.18
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +1

Query: 103 FKGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSI 252
           F  KRILVT             L +AGA ++A +R  ++L SL  E  S+
Sbjct: 7   FTDKRILVTGASQGIGKEICLSLAKAGAQVIAFARNEANLLSLVKETTSL 56


>Z75527-10|CAJ80819.1|  251|Caenorhabditis elegans Hypothetical
           protein R11D1.11 protein.
          Length = 251

 Score = 31.9 bits (69), Expect = 0.18
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +1

Query: 103 FKGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSI 252
           F  KRILVT             L +AGA ++A +R  ++L SL  E  S+
Sbjct: 7   FTDKRILVTGASQGIGKEICLSLAKAGAQVIAFARNEANLLSLVKETTSL 56


>Z74042-10|CAA98524.1|  307|Caenorhabditis elegans Hypothetical
           protein T11F9.11 protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = +3

Query: 264 VDIGDWEKTRKVVX----SLGHFDALVNNAAVAVCEPFLDCSPINFDKTFDV 407
           VD+  ++   KV      ++G  D L+NNA +   +   DC     +KT  V
Sbjct: 95  VDLSQYKDIHKVAKETKEAVGDIDILINNAGIVTGKKLFDCPDELMEKTMAV 146


>Z68337-4|CAA92744.1|  364|Caenorhabditis elegans Hypothetical
           protein M7.7 protein.
          Length = 364

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 16/62 (25%), Positives = 25/62 (40%)
 Frame = -1

Query: 401 KRFVKVDRRTVQKWFTYSNSCVVHQRIKVT*RXNNLPRLLPISYINVYNSIEGYSL*RLS 222
           K  VKV+ +       Y N C   + +      NNLP   P    + Y  I+G+    + 
Sbjct: 46  KSVVKVEGQNAMFQLLY-NECSCLKSLNTAFNPNNLPGASPFLRFHGYGGIDGFRWLAME 104

Query: 221 KC 216
           +C
Sbjct: 105 RC 106


>AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical
           protein T04B8.5c protein.
          Length = 836

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 398 RFVKVDRRTVQKWFTYSNSCVVHQRIKVT*RXNNLPRLLPISYINVYNSI 249
           RF K+DR  V ++FT  +   + + +       NL RL P+ Y+NV   +
Sbjct: 589 RFSKIDRAAVVEYFTAGD--YMPKEL-----DGNLERLTPVDYVNVLKDV 631


>AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical
           protein T04B8.5b protein.
          Length = 939

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 398 RFVKVDRRTVQKWFTYSNSCVVHQRIKVT*RXNNLPRLLPISYINVYNSI 249
           RF K+DR  V ++FT  +   + + +       NL RL P+ Y+NV   +
Sbjct: 692 RFSKIDRAAVVEYFTAGD--YMPKEL-----DGNLERLTPVDYVNVLKDV 734


>AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical
           protein T04B8.5a protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 398 RFVKVDRRTVQKWFTYSNSCVVHQRIKVT*RXNNLPRLLPISYINVYNSI 249
           RF K+DR  V ++FT  +   + + +       NL RL P+ Y+NV   +
Sbjct: 705 RFSKIDRAAVVEYFTAGD--YMPKEL-----DGNLERLTPVDYVNVLKDV 747


>Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical
           protein F13H10.4c protein.
          Length = 792

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 276 DWEKTRKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFD 392
           D+++T K +  L +FD+LV +      + F D    +FD
Sbjct: 570 DYQRTAKAMEELNNFDSLVKDHWSEEAQGFFDYGKHSFD 608


>Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical
           protein F13H10.4b protein.
          Length = 789

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 276 DWEKTRKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFD 392
           D+++T K +  L +FD+LV +      + F D    +FD
Sbjct: 567 DYQRTAKAMEELNNFDSLVKDHWSEEAQGFFDYGKHSFD 605


>Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical
           protein F13H10.4a protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 276 DWEKTRKVVXSLGHFDALVNNAAVAVCEPFLDCSPINFD 392
           D+++T K +  L +FD+LV +      + F D    +FD
Sbjct: 574 DYQRTAKAMEELNNFDSLVKDHWSEEAQGFFDYGKHSFD 612


>Z93393-6|CAB07691.2|  495|Caenorhabditis elegans Hypothetical
           protein Y48E1B.5 protein.
          Length = 495

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 359 FTYSNSCVVHQRIKVT*RXNNLPRLLPIS 273
           F+Y NS + HQ++        LP + PIS
Sbjct: 308 FSYQNSSIFHQKLSKIFSAEPLPDIYPIS 336


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,148,352
Number of Sequences: 27780
Number of extensions: 140611
Number of successful extensions: 330
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)