Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0701
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0BWH7 Cluster: Putative uncharacterized protein; n=1; ...    38   0.22 
UniRef50_Q4DZA0 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_A2ERB7 Cluster: PIKK family atypical protein kinase; n=...    33   4.8  
UniRef50_Q4A152 Cluster: Putative modification methylase; n=1; S...    33   6.4  

>UniRef50_Q0BWH7 Cluster: Putative uncharacterized protein; n=1;
           Hyphomonas neptunium ATCC 15444|Rep: Putative
           uncharacterized protein - Hyphomonas neptunium (strain
           ATCC 15444)
          Length = 427

 Score = 37.9 bits (84), Expect = 0.22
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +1

Query: 235 PSAGLNTVHRSIRMHRTSCPLGHDDFQNCF-CPYTPFYGTYTLNNWDLV---VPRICISG 402
           PSAG +   R+ R  ++ C     D++ CF   +  +Y  Y LNNW+ +       C  G
Sbjct: 257 PSAGYSNGSRAERYFKSMCGAATPDYEACFNVAWLNYYTDYGLNNWETIRTYATTACFQG 316

Query: 403 G 405
           G
Sbjct: 317 G 317


>UniRef50_Q4DZA0 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 849

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +1

Query: 223 EKLIPSAGLNTVHRSIRMHRTSCPLGHDDFQ 315
           +KL P+ G++ +++ +R+ +T C  GH DFQ
Sbjct: 45  DKLKPNTGVHALYKVLRIIKTMCETGHSDFQ 75


>UniRef50_A2ERB7 Cluster: PIKK family atypical protein kinase; n=1;
           Trichomonas vaginalis G3|Rep: PIKK family atypical
           protein kinase - Trichomonas vaginalis G3
          Length = 2158

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
 Frame = +3

Query: 138 NTSFIFITRCYSFTVDVNREHLLSMYFIRKIDTLCGIEHG---ASLDTNAPDILSFRPRR 308
           N    F+   +S     + E+   +Y +  +  + GI+ G   A  +  A DI++  P  
Sbjct: 71  NEEAFFLNELFSLISIAHLEYNTPLY-LTTVAAIIGIDLGDKAAKANRIARDIINIPPDP 129

Query: 309 LPKLFLSLHPILRYLHPK*LGSSCTSYLY 395
            PK FL L  IL YLH   +  SCT  ++
Sbjct: 130 NPKNFLLLKKILAYLHHTLV--SCTQIIF 156


>UniRef50_Q4A152 Cluster: Putative modification methylase; n=1;
           Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305|Rep: Putative modification methylase -
           Staphylococcus saprophyticus subsp. saprophyticus
           (strain ATCC 15305 /DSM 20229)
          Length = 347

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +3

Query: 132 DPNTSFIFITRCYSFTVDVNREHLLSMYFIRK-IDTLCGIEHGASLDTNAPDILSFRPRR 308
           D     +  +  Y F VD  R H LSMY++++ I+ L   E GA    N    LS     
Sbjct: 210 DCKVDMVMTSPPYPFAVDFIRYHRLSMYWLQENIEQLTRQEIGARNKRNKKGNLSLFFNE 269

Query: 309 LPKLFLSLHPILR 347
           + K F+++  ++R
Sbjct: 270 IEKSFINIMRVVR 282


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,124,126
Number of Sequences: 1657284
Number of extensions: 12345515
Number of successful extensions: 25502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25498
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)