Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0701
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        26   0.33 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.75 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.75 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   3.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.0  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 364 YLGCRYRKMGCRDKNNFGSRRGLKDKMSGAFVS 266
           + G  Y+  GC D + F   +G  +++ G F++
Sbjct: 19  FQGTTYKYTGCSDNDGFLPGQGRVNQLGGVFIN 51


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 120 GLTRDPNTSFIFITRCYSFTVDVNREHLLSM 212
           G  RDPNT F+  T    FT+   R +   M
Sbjct: 318 GQFRDPNTGFMTNTPLEVFTITPGRRYRFRM 348


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 120 GLTRDPNTSFIFITRCYSFTVDVNREHLLSM 212
           G  RDPNT F+  T    FT+   R +   M
Sbjct: 318 GQFRDPNTGFMTNTPLEVFTITPGRRYRFRM 348


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 90  NRRDGITYPCGLTRDPNTSFIFITRCYS 173
           N  DG+    G+ RDP+   ++ T C S
Sbjct: 437 NESDGVCTKEGIVRDPSDCSVYYT-CVS 463


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 146 FYFYYAMLFLHC 181
           +YFYYA + L C
Sbjct: 101 YYFYYAFIILLC 112


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 565 QLYSSTHKIYFRLADDFNLCKCLIL 639
           +LY S H I  +L +DF  C  L L
Sbjct: 74  RLYPSVHFISRKLGEDFVTCNGLKL 98


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 367 NYLGCRYRKMGCRDKNNFGSRRGLK 293
           N+L  RY+ +G +  N FG +   K
Sbjct: 33  NFLPERYKPIGVQIANRFGEQANEK 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,697
Number of Sequences: 336
Number of extensions: 3662
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)