Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0701
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p pro...    31   1.4  
AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p pro...    31   1.4  
AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA...    31   1.4  
AY061126-1|AAL28674.1|  151|Drosophila melanogaster LD10746p pro...    29   7.7  
AE014298-1570|AAF48010.1|  151|Drosophila melanogaster CG1397-PA...    29   7.7  

>AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p
           protein.
          Length = 892

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 156 ITRCYSFTVDVNREHL-LSMYFIRKIDTLCGIEHGASLDT 272
           +T+CY    D ++    L  + +RKI  LCG++ G   DT
Sbjct: 836 VTKCYINGFDKSKNFAALEQFLVRKIRFLCGVKKGPEPDT 875


>AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p
           protein.
          Length = 892

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 156 ITRCYSFTVDVNREHL-LSMYFIRKIDTLCGIEHGASLDT 272
           +T+CY    D ++    L  + +RKI  LCG++ G   DT
Sbjct: 836 VTKCYINGFDKSKNFAALEQFLVRKIRFLCGVKKGPEPDT 875


>AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA
           protein.
          Length = 892

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 156 ITRCYSFTVDVNREHL-LSMYFIRKIDTLCGIEHGASLDT 272
           +T+CY    D ++    L  + +RKI  LCG++ G   DT
Sbjct: 836 VTKCYINGFDKSKNFAALEQFLVRKIRFLCGVKKGPEPDT 875


>AY061126-1|AAL28674.1|  151|Drosophila melanogaster LD10746p
           protein.
          Length = 151

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 346 GTYTLNNWDLVVPRICISGGKFNN 417
           GTY ++++DL + R+C+  G  +N
Sbjct: 73  GTYAIDDYDLAIQRMCVQRGPDDN 96


>AE014298-1570|AAF48010.1|  151|Drosophila melanogaster CG1397-PA
           protein.
          Length = 151

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 346 GTYTLNNWDLVVPRICISGGKFNN 417
           GTY ++++DL + R+C+  G  +N
Sbjct: 73  GTYAIDDYDLAIQRMCVQRGPDDN 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,110,551
Number of Sequences: 53049
Number of extensions: 564528
Number of successful extensions: 1305
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)