Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0599
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      31   3.1  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    31   3.1  
EF623992-1|ABR25252.1|  354|Homo sapiens Uba6-specific E2 conjug...    29   9.3  

>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -3

Query: 290 AAGGAKLPSAGLA*TPLRPKPA*PNPARICSLWSPESRE 174
           A  G   P++    TP  P P  P PA +CS  SPE R+
Sbjct: 56  AQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -3

Query: 290 AAGGAKLPSAGLA*TPLRPKPA*PNPARICSLWSPESRE 174
           A  G   P++    TP  P P  P PA +CS  SPE R+
Sbjct: 56  AQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92


>EF623992-1|ABR25252.1|  354|Homo sapiens Uba6-specific E2
           conjugating enzyme 1 protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 290 AAGGAKLPSAGLA*TPLRPKPA*PNPARICSLWSP 186
           AAGGA  P +GLA  P  P  A  + A + S W P
Sbjct: 51  AAGGAGGPGSGLAPLPGLPPSAAAHGAALLSHWDP 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,638,808
Number of Sequences: 237096
Number of extensions: 1493261
Number of successful extensions: 3551
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3551
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)