Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0599
         (508 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g10150.1 68418.m01175 expressed protein                             31   0.45 
At1g67970.1 68414.m07764 heat shock factor protein, putative (HS...    30   1.0  
At2g18250.1 68415.m02128 cytidylyltransferase domain-containing ...    28   4.2  
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei...    27   5.5  
At1g61520.1 68414.m06931 chlorophyll A-B binding protein / LHCI ...    27   9.6  
At1g54010.1 68414.m06153 myrosinase-associated protein, putative...    27   9.6  

>At5g10150.1 68418.m01175 expressed protein
          Length = 414

 Score = 31.1 bits (67), Expect = 0.45
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
 Frame = +2

Query: 23  STELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVS 202
           STE  P+L   +  ++ ++DS DL   N +  +  R E  TR+     +EP   RGS + 
Sbjct: 220 STEQKPNLTKTEQDLQVRSDSSDLTRSNPV-VKPRRHEVSTRVEDGDPVEPGSGRGS-MW 277

Query: 203 ISLPDSARLASALEAFRLI-PRMVASHHRPLGECMNQMSETAV 328
           + +     +A+   A  ++ PR    + R    C N + +T V
Sbjct: 278 LQMISCGHIATKYYAPSVMNPRQKEENLRKGVLCKNIVKKTVV 320


>At1g67970.1 68414.m07764 heat shock factor protein, putative (HSF5)
           / heat shock transcription factor, putative (HSTF5)
           identical to heat shock transcription factor 5 (HSF5)
           SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam
           profile: PF00447 HSF-type DNA-binding domain
          Length = 374

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 288 GRWCEATIRGISLNASKAEASLAESGKDMLTVEPRESGGSKQCD 157
           G W +  +   S   +K + ++ + GKD LT+E  E  G+ + D
Sbjct: 286 GAWEKLLLLSPSRKKTKKQENIVKKGKDDLTLEEEEEDGTMELD 329


>At2g18250.1 68415.m02128 cytidylyltransferase domain-containing
           protein similar to CoA synthase [Mus musculus]
           GI:21780289, bifunctional phosphopantetheine adenylyl
           transferase / dephospho CoA kinase [Sus scrofa]
           GI:20465246; contains Pfam profile PF01467:
           Cytidylyltransferase
          Length = 176

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 13/58 (22%), Positives = 31/58 (53%)
 Frame = -2

Query: 261 GISLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 88
           G+S+N  +AE  L++   +++ +    S G+K    T R   +++ ++++ P   + S
Sbjct: 119 GLSVNRKRAERGLSQLKIEVVEIVSDGSSGNKISSSTLRKMEAEKASKQKQPAEEKAS 176


>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
           hsp20 family protein contains Pfam profile: PF00011
           Hsp20/alpha crystallin family
          Length = 285

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 239 RPKPA*PNPARICSLWSPESREALNNVTLLVAFRIQNAR-RDVEAHLD 99
           RPK   P  A + ++WSP S  A +  + +VA  +  A   D+   +D
Sbjct: 169 RPKLDLPKLANLGTVWSPRSNVAESTHSYVVAIELPGASINDIRVEVD 216


>At1g61520.1 68414.m06931 chlorophyll A-B binding protein / LHCI
           type III (LHCA3.1) nearly identical to PSI type III
           chlorophyll a/b-binding protein GI:430947; contains Pfam
           profile: PF00504 chlorophyll A-B binding protein;
           similar to PSI type III chlorophyll a/b-binding protein
           GI:430947 from [Arabidopsis thaliana]
          Length = 273

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 404 LSPAHVPF*WVNNPTLGEFCFAMIGRAEHRRIK 502
           + PA     W +N TL     A++G AEHRR++
Sbjct: 140 IPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQ 172


>At1g54010.1 68414.m06153 myrosinase-associated protein, putative
           similar to myrosinase-associated protein GI:1769969 from
           [Brassica napus]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 386

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -2

Query: 504 FLILRCSALPI-IAKQNSPSVGLFT 433
           FL+L     PI +A QN P+VGLFT
Sbjct: 15  FLVLTLFNKPITVAGQNIPAVGLFT 39


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,983,317
Number of Sequences: 28952
Number of extensions: 219227
Number of successful extensions: 641
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)