Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0587
         (522 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.8  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   5.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   8.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 56  TNPSNERTSTAMVLTSTLNSS 118
           T+PSN  TST+   ++  NSS
Sbjct: 424 TSPSNTNTSTSSTNSNKPNSS 444


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -2

Query: 218 LQVDVLIF-KYWLYLVLWA 165
           LQV  + F  YWLYLVL A
Sbjct: 49  LQVLFVSFVSYWLYLVLEA 67


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -2

Query: 218 LQVDVLIF-KYWLYLVLWA 165
           LQV  + F  YWLYLVL A
Sbjct: 67  LQVLFVSFVSYWLYLVLEA 85


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 249 RQSADSTREQWFFQPAKY 302
           ++ + S R +WFFQ  ++
Sbjct: 78  QEGSKSGRNKWFFQKGRF 95


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 222 QRSGPCCIRRQSADSTREQWFFQPAKYEND 311
           Q+ G   I R   D+  + W    AKY+ D
Sbjct: 84  QKEGSDFIMRYLIDNKPDYWKALEAKYDPD 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,735
Number of Sequences: 336
Number of extensions: 2073
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)