Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0587
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p pro...    29   2.9  
AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-P...    29   2.9  
AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-P...    29   2.9  
BT016143-1|AAV37028.1| 1240|Drosophila melanogaster AT25839p pro...    28   6.7  
AY051540-1|AAK92964.1|  777|Drosophila melanogaster GH19061p pro...    28   6.7  
AE013599-727|AAF59033.1| 1240|Drosophila melanogaster CG8266-PA,...    28   6.7  
AE013599-726|AAM71085.1| 1241|Drosophila melanogaster CG8266-PB,...    28   6.7  

>BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 324 IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 443
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-PA,
           isoform A protein.
          Length = 698

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 324 IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 443
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-PB,
           isoform B protein.
          Length = 1298

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 324 IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 443
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>BT016143-1|AAV37028.1| 1240|Drosophila melanogaster AT25839p
           protein.
          Length = 1240

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/53 (41%), Positives = 26/53 (49%)
 Frame = -3

Query: 403 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALCRR 245
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL  R
Sbjct: 561 CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALVSR 607


>AY051540-1|AAK92964.1|  777|Drosophila melanogaster GH19061p
           protein.
          Length = 777

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/53 (41%), Positives = 26/53 (49%)
 Frame = -3

Query: 403 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALCRR 245
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL  R
Sbjct: 98  CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALVSR 144


>AE013599-727|AAF59033.1| 1240|Drosophila melanogaster CG8266-PA,
           isoform A protein.
          Length = 1240

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/53 (41%), Positives = 26/53 (49%)
 Frame = -3

Query: 403 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALCRR 245
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL  R
Sbjct: 561 CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALVSR 607


>AE013599-726|AAM71085.1| 1241|Drosophila melanogaster CG8266-PB,
           isoform B protein.
          Length = 1241

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/53 (41%), Positives = 26/53 (49%)
 Frame = -3

Query: 403 CPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALCRR 245
           C  A R PEA  I S+  A + +     NRT   YL   KN  S V+SAL  R
Sbjct: 562 CLEAQRIPEALIIAST--AGIETL----NRTQTRYLLQQKNELSHVISALVSR 608


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,045,266
Number of Sequences: 53049
Number of extensions: 392856
Number of successful extensions: 1330
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)