SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0586
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.10 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          27   0.14 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           27   0.14 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   0.98 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   0.98 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.98 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   5.2  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   5.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 0.10
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 418 VKLLPDNTDGLLTIVTTG 365
           +K++P+  DG LTI+ TG
Sbjct: 71  IKIIPNKNDGTLTIIDTG 88



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 129 QSNETQEEIKEVFEGSCKLI 188
           +  + +EE K  FEG CK++
Sbjct: 545 EEKKKREEDKAKFEGLCKVM 564


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +2

Query: 101 HGEAGERPTTEQ--RNSGRNKRSIRGFVQVDFHKVRGRGMYEIGR*VRGRAD*ALASEMN 274
           HG+   RP   Q   N   ++R I+ + Q    K +   M ++       A+   AS ++
Sbjct: 109 HGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAE--TASSLS 166

Query: 275 PQAVCSVAGLCNNAKIDRLL 334
           PQ+V S A   ++  +DRLL
Sbjct: 167 PQSVASTASSADHQIVDRLL 186


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +2

Query: 101 HGEAGERPTTEQ--RNSGRNKRSIRGFVQVDFHKVRGRGMYEIGR*VRGRAD*ALASEMN 274
           HG+   RP   Q   N   ++R I+ + Q    K +   M ++       A+   AS ++
Sbjct: 100 HGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAE--TASSLS 157

Query: 275 PQAVCSVAGLCNNAKIDRLL 334
           PQ+V S A   ++  +DRLL
Sbjct: 158 PQSVASTASSADHQIVDRLL 177


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 33  INRVWSKMTFPEDNDNVCQICLDMVKQA 116
           +N + S +TF  D   VC +C   +++A
Sbjct: 560 LNPILSNVTFVIDVVYVCDVCYSTIEEA 587


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 33  INRVWSKMTFPEDNDNVCQICLDMVKQA 116
           +N + S +TF  D   VC +C   +++A
Sbjct: 285 LNPILSNVTFVIDVVYVCDVCYSTIEEA 312


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 93  ISGIRCRCPPG 61
           + G  C+CPPG
Sbjct: 279 VGGFECKCPPG 289


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 69  DNDNVCQICLDMVKQARDQLQSNE 140
           DND V Q+  D+     D   +NE
Sbjct: 341 DNDEVLQVLEDIYSDLLDLTDNNE 364


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = -3

Query: 272 SSLKRALNQLDHELIGQFHTSLCHELYGNQLARTLEY 162
           S L++ ++ ++H+L       +CH +   + A  + Y
Sbjct: 118 SKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHY 154


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 62  PGGQRQRMPDMLGHGEAGERPTTEQRNSG 148
           PGG+    P  +    A ER   +Q N+G
Sbjct: 43  PGGKTAPQPVAVARRNARERNRVKQVNNG 71


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = -3

Query: 224 QFHT---SLCHELYGNQLARTLEYFFYFFLSFVAL 129
           QF+T   S C+  Y +++ +   Y   FF+ +V+L
Sbjct: 264 QFNTIVFSFCYCYYNSKMTKDGVYNTLFFIVYVSL 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 204  PRTLWKSTCTNP 169
            P T W ST T+P
Sbjct: 1039 PSTWWSSTTTSP 1050


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,110
Number of Sequences: 336
Number of extensions: 2712
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -