Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0586
         (538 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40797-3|AAB37550.2|  238|Caenorhabditis elegans Saposin-like pr...    36   0.024
U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like pr...    36   0.024
Z75544-5|CAJ28586.1|  112|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z70204-2|CAA94112.1|  169|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z81030-6|CAB02710.1|  342|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AC090999-26|ABA00172.1|  398|Caenorhabditis elegans Hypothetical...    27   6.5  

>U40797-3|AAB37550.2|  238|Caenorhabditis elegans Saposin-like
           protein family protein10, isoform a protein.
          Length = 238

 Score = 35.5 bits (78), Expect = 0.024
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
 Frame = +2

Query: 272 NPQAVCSVAGLCNNAKID---RLLVDY--NAQRELRAG---CYNCQKTV----GVVRKKF 415
           NP AVC+   +C+N KID   R+L+++   AQ+   A    C  CQ  V     VV  K 
Sbjct: 98  NPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVCDECQFVVKELKTVVEDKK 157

Query: 416 DETKYEDFLVGLLQVCRNMDSLSDSCSMLI 505
            + +  DFL     VC+++      C +++
Sbjct: 158 SQAEARDFL--RENVCKSLGQYRGFCDLVV 185


>U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like
           protein family protein10, isoform b protein.
          Length = 429

 Score = 35.5 bits (78), Expect = 0.024
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
 Frame = +2

Query: 272 NPQAVCSVAGLCNNAKID---RLLVDY--NAQRELRAG---CYNCQKTV----GVVRKKF 415
           NP AVC+   +C+N KID   R+L+++   AQ+   A    C  CQ  V     VV  K 
Sbjct: 98  NPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVCDECQFVVKELKTVVEDKK 157

Query: 416 DETKYEDFLVGLLQVCRNMDSLSDSCSMLI 505
            + +  DFL     VC+++      C +++
Sbjct: 158 SQAEARDFL--RENVCKSLGQYRGFCDLVV 185


>Z75544-5|CAJ28586.1|  112|Caenorhabditis elegans Hypothetical
           protein K02A11.4 protein.
          Length = 112

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 14/62 (22%), Positives = 33/62 (53%)
 Frame = +3

Query: 72  NDNVCQICLDMVKQARDQLQSNETQEEIKEVFEGSCKLISIKFVAEGCMKLADEFVVELI 251
           N ++C++ L+ V+       +N T +++++     C L    F  + C K+ADE   +++
Sbjct: 34  NCHMCEVILNNVRYEYRNNFTNVTPDQLRQSLYQQCDLNLNGFTDQECHKIADEDSADIL 93

Query: 252 ER 257
           ++
Sbjct: 94  QQ 95


>Z70204-2|CAA94112.1|  169|Caenorhabditis elegans Hypothetical
           protein C11G6.2 protein.
          Length = 169

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +3

Query: 126 LQSNETQEEIKEVFEGSCKLISIKFVAEGCMKLADEFVVELIERSLQR*TPKPCALSLDS 305
           + +NE Q+ + ++     K   +  +  G  +    F+++LIE S+ R   K   L   S
Sbjct: 1   MANNEQQDLLNKIIRDDSKNKQVLLMINGAARTGKTFLIKLIENSMNRSAGKRVVLMTGS 60


>Z81030-6|CAB02710.1|  342|Caenorhabditis elegans Hypothetical
           protein C01G10.8 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 9   ECNATPHCINRVWSKMTFPEDNDNVCQICLDMVKQARDQLQSNETQEEIKEVFE 170
           E NATP  +NR+   +T     D    + +D +K+   +  +N  + ++  +FE
Sbjct: 29  EKNATPWSLNRLRELLTGFSSEDGPIVVTIDEIKKIDGEATANNRKAKLIFLFE 82


>AC090999-26|ABA00172.1|  398|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.19 protein.
          Length = 398

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +3

Query: 33  INRVWSKMTFPEDNDNVCQICLDMVKQARDQLQSNETQEEIK 158
           IN V + +T PED +NV +  ++ +K+ R  + S + + EI+
Sbjct: 263 INVVNNLVTTPEDAENVKKYNVESIKKRRKAMNSIKKRVEIR 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,477,590
Number of Sequences: 27780
Number of extensions: 259687
Number of successful extensions: 905
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)