Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0578
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.75 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 465 SRCKEEQSTPELLSPRCLGTDS 400
           SRC   +S+  L+ PRC   +S
Sbjct: 82  SRCNSRESSDSLVQPRCPSGES 103


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 408 FRDISG*AIQVYFVPLYIYF 467
           FR+    A+Q+YF   Y YF
Sbjct: 142 FREYLAEAVQLYFQFYYTYF 161


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 182 VFFLSSILNIITKKKDSTKIFSNAILYCYYHVSAL*IFYSLISI 51
           V F +++  II +   S KI    +   YY +S   +   LIS+
Sbjct: 168 VSFATNLYFIIIQLFGSMKIVKGTLKTAYYLISFALLIMRLISV 211


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 139 KTARKYSQMLYYIVIIMYLHCEFFILLSQFIKINDFGREALRRL 8
           +  RK  + + YIV++ +     FIL+  F  +    R  L RL
Sbjct: 276 RLVRKVDKEIAYIVLLTFASDLLFILIQLFNSLRRM-RNDLERL 318


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/20 (35%), Positives = 11/20 (55%), Gaps = 4/20 (20%)
 Frame = +3

Query: 513 HITIHTN----ACTWIYCGE 560
           H+  HT      C W++CG+
Sbjct: 335 HLRWHTGERPFVCNWLFCGK 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,251
Number of Sequences: 336
Number of extensions: 3641
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)