Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0575
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    23   1.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   1.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   5.7  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    21   7.6  

>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -1

Query: 264 HAHLYISMNCLTTSTFMYLSQLFSMLY 184
           H+H+ +S++C  + +   LS  FS ++
Sbjct: 34  HSHMTVSLHCSLSLSLSLLSPSFSPIW 60


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +2

Query: 110  LCIMKLLDHILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVKQFM 244
            L ++ ++ H +   MF+D+K+I ++   + S     NV   K+ +
Sbjct: 1988 LSVLWMVVHSVHGIMFKDLKQILRKEQCDASILLTANVPSAKKII 2032


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 215 CTCRNFSRCYTP 180
           C C +FSRC +P
Sbjct: 815 CYCVSFSRCRSP 826


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 91  KVYHWFLGEDHRP 53
           KV+HWF G    P
Sbjct: 373 KVFHWFQGARSAP 385


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,234
Number of Sequences: 2352
Number of extensions: 5451
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)