Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0556
(429 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1157 - 31333870-31334220,31334440-31334590,31334678-313349... 33 0.074
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 33 0.074
07_03_1257 - 25241194-25242018 29 1.6
08_01_0682 + 5974622-5974745,5976182-5976371,5976953-5977024,597... 29 2.1
04_04_1156 - 31319747-31320085,31320556-31320706,31320795-313210... 28 2.8
01_06_0695 - 31292622-31293317 28 2.8
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 28 3.7
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602... 27 4.9
07_03_0626 + 20060013-20060273,20061017-20061274 27 4.9
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464... 27 4.9
04_04_1158 - 31342934-31343272,31343508-31343658,31343745-313439... 27 4.9
10_08_0113 - 14896341-14897153 27 6.4
08_02_1485 - 27466761-27467753 27 6.4
07_03_1692 - 28733184-28733980,28734306-28734373,28734481-287345... 27 6.4
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 27 6.4
05_03_0188 + 9417186-9417306,9417418-9417604,9417669-9417801,941... 27 6.4
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364... 27 6.4
01_06_0723 + 31501900-31502808,31502846-31503295 27 6.4
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 27 6.4
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 27 8.5
05_04_0017 + 17180991-17181074,17181657-17181759,17181794-17182014 27 8.5
04_03_1018 + 21753634-21753640,21754282-21754315,21754413-217544... 27 8.5
03_05_0751 - 27389910-27392105 27 8.5
01_01_0012 + 71903-72935,73468-73981,74619-76008 27 8.5
>04_04_1157 -
31333870-31334220,31334440-31334590,31334678-31334909,
31335001-31335211,31335517-31335635,31335720-31335953,
31336000-31336201,31336297-31336676,31336792-31336856,
31337362-31337427,31337883-31337957,31338233-31338304,
31338994-31339062,31339150-31339221,31339325-31339396,
31339791-31339862,31339947-31340018,31340474-31340545,
31340645-31340828,31341474-31341588
Length = 961
Score = 33.5 bits (73), Expect = 0.074
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 330 ARICSLWSPESREALNNVTLLVAFRIKTRDATSKPIWIAE 211
A +C+ WSP R ++ V ++A ++ D +KP +I E
Sbjct: 878 ALLCTQWSPHQRAPMSRVVSMLAGDVEVPDVLTKPSYITE 917
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 33.5 bits (73), Expect = 0.074
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +1
Query: 82 PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFDAK 261
PS TP ER S+D PR Y R+RD K+ S D + R S + +
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRDY--SHSKHERSSHTEHR 422
Query: 262 RD 267
RD
Sbjct: 423 RD 424
>07_03_1257 - 25241194-25242018
Length = 274
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 1 PLPARAGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRH 141
P P AG D +P S+ S+ L STT + R +S PRH
Sbjct: 52 PAPDVAGRDSTPSPA-SMTPSRCRTTLASTTTTRRRPPRRLHSRPRH 97
>08_01_0682 +
5974622-5974745,5976182-5976371,5976953-5977024,
5977482-5977553,5977688-5977759,5977842-5977913,
5978690-5978761,5978855-5978926,5979017-5979091,
5979529-5979594,5979821-5979885,5979975-5980354,
5980438-5980636,5980713-5980763,5980955-5981073,
5981190-5981400,5981524-5981755,5981842-5981992,
5982089-5982447,5982750-5982768
Length = 890
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 330 ARICSLWSPESREALNNVTLLVAFRIKTRDATSKPIWIAE 211
A +C+ SP R +++ V ++A I+ + +KP +I E
Sbjct: 798 ALLCTQGSPHQRPSMSRVMAILAGDIEVTEVVTKPSYITE 837
>04_04_1156 - 31319747-31320085,31320556-31320706,31320795-31321026,
31321121-31321331,31321646-31321764,31321835-31322032,
31322163-31322364,31322456-31322832,31322937-31323007,
31326264-31326329,31326414-31326479,31326761-31326835,
31326944-31327018,31327115-31327186,31327683-31327904,
31328012-31328083,31328425-31328496,31329410-31329481,
31329716-31329896,31332132-31332237
Length = 992
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 330 ARICSLWSPESREALNNVTLLVAFRIKTRDATSKPIWIAE 211
A +C+ SP R +++ V ++A ++ + +KP +I E
Sbjct: 913 ALLCTQGSPHQRPSMSRVVTMLAGDVEVPEVVTKPSYITE 952
>01_06_0695 - 31292622-31293317
Length = 231
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +1
Query: 34 PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 168
P L Q D PS++ SST S P HR L P R
Sbjct: 3 PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47
>08_02_0104 +
12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 28 ESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSI 207
+SPG L R HD +L KSST + R E SR +KT+S+
Sbjct: 734 DSPGDSL---RDVHDISLNLKLSLDSEKSSTKENSVRRNLEDAVQKLSRGVSANRKTESV 790
Query: 208 D 210
+
Sbjct: 791 E 791
>08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,
6027187-6027258,6027354-6027425,6027784-6027855,
6027980-6028051,6028134-6028205,6028483-6028554,
6028791-6028865,6028970-6029041,6029134-6029199,
6029267-6029332,6029409-6029453,6029542-6029606,
6029697-6030076,6030455-6030653,6030725-6030883,
6030966-6031084,6031156-6031200,6031226-6031791,
6031871-6032021,6032117-6032454,6033702-6033765,
6034329-6034370,6035572-6035575,6035853-6036039,
6037252-6037323,6037687-6037758,6037867-6037938,
6038019-6038090,6038651-6038725,6038815-6038886,
6038988-6039053,6039163-6039228,6039348-6039392,
6039469-6039533,6039615-6039994,6040070-6040202,
6040354-6040512,6040599-6040717,6040805-6041015,
6041155-6041386,6041469-6041619,6041725-6042084
Length = 1952
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 324 ICSLWSPESREALNNVTLLVAFRIKTRDATSKPIWIAEIDAIG 196
+C+ SP R ++ V ++ I D +KP +I E+ G
Sbjct: 1868 LCTQGSPHQRPPMSRVVAMLTGDIPVSDVVAKPNYIIELQLRG 1910
>07_03_0626 + 20060013-20060273,20061017-20061274
Length = 172
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 337 RLGWLRP*RRSGIIP 381
RLGWLRP R S ++P
Sbjct: 32 RLGWLRPSRLSAVVP 46
>05_01_0538 +
4646772-4647059,4647462-4647542,4647819-4647890,
4648458-4649321
Length = 434
Score = 27.5 bits (58), Expect = 4.9
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 13 RAGSDESPGAGLSL-NRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRD-ARV 186
R+GS E P S +RS D S+ R SS DY P H + D SRD R
Sbjct: 242 RSGSREVPDRDRSSRDRSSRDYDR-SSHDRDRDHSSRDYDRPSHDRDRDRDRSSRDYDRS 300
Query: 187 KKKTD-SIDLRD 219
+ D D+RD
Sbjct: 301 SRDRDHDRDIRD 312
>04_04_1158 -
31342934-31343272,31343508-31343658,31343745-31343976,
31344173-31344284,31344572-31344690,31344772-31344936,
31345049-31345247,31345351-31345733,31345838-31345902,
31346003-31346047,31346402-31346467,31346707-31346778,
31346907-31346981,31347086-31347157,31347255-31347326,
31347954-31348022,31348109-31348180,31348280-31348351,
31348756-31348827,31349295-31349366,31349528-31349711,
31350082-31350220
Length = 948
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 330 ARICSLWSPESREALNNVTLLVAFRIKTRDATSKPIWIAE 211
A +C+ SP R ++ V ++A ++ + +KP +I E
Sbjct: 869 ALLCTQGSPHQRPPMSRVVTMLAGDVEAPEVVTKPSYITE 908
>10_08_0113 - 14896341-14897153
Length = 270
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
Frame = -1
Query: 150 LSSMSGLGIVCRRL----PFLAGCCAR 82
L++++GLGI RR P LAGCC R
Sbjct: 181 LAAIAGLGIPWRRSWPSPPSLAGCCCR 207
>08_02_1485 - 27466761-27467753
Length = 330
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 291 PPDSRGSTVSISLPDSARLASALEAFRHNPA 383
PP + G +S +P A LA++L + NPA
Sbjct: 39 PPSATGPVLSRDVPLDASLATSLRLYLPNPA 69
>07_03_1692 -
28733184-28733980,28734306-28734373,28734481-28734594,
28734835-28734884,28735012-28735422,28735534-28735610,
28736083-28736257,28736843-28736939,28737070-28737833,
28737900-28738001,28738093-28738174,28739004-28739161
Length = 964
Score = 27.1 bits (57), Expect = 6.4
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = -3
Query: 415 GRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGG-SKQCDFTSRVSHQNARR 239
G AA A L +A C+NA+ + + +G + P SGG + CD Q
Sbjct: 3 GMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLVFC 62
Query: 238 DVEAHLDRGDRCYRFFS*HVHHG 170
D+ + G R F +H G
Sbjct: 63 DIFHQKESGWRDCSFCGKRLHCG 85
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 258 RIKTRDATSKPIWIAEIDAIG 196
RI ++A KP W+ ++DA+G
Sbjct: 398 RILWKEAEGKPDWVKDLDAVG 418
>05_03_0188 + 9417186-9417306,9417418-9417604,9417669-9417801,
9418673-9418752,9421940-9422011,9422211-9422282,
9422361-9422432,9422720-9422791,9423038-9423109,
9423335-9423406,9423497-9423568,9423648-9423722,
9423824-9423895,9424072-9424137,9424223-9424299,
9424642-9425021,9425112-9425310,9425380-9425538,
9425620-9425738,9425942-9426092,9426257-9426488,
9426573-9426723,9426808-9427125
Length = 1007
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -1
Query: 330 ARICSLWSPESREALNNVTLLVAFRIKTRDATSKPIWIAE 211
A +C+ SP R ++ V ++ ++ + +KP +I E
Sbjct: 935 ALLCTQGSPHQRPPMSKVVAMLTGEVEVAEVVTKPSYITE 974
>05_01_0460 -
3644229-3644420,3644623-3644865,3644959-3645237,
3645328-3645525,3645614-3646249,3646352-3646606,
3646718-3646824,3646909-3650705,3650816-3651305,
3652043-3652433,3652621-3652713,3652818-3652941,
3653871-3654118
Length = 2350
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 1 PLPARAGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPR 138
PLPA A + PG G L ++ +A L + + +S Y + R
Sbjct: 16 PLPAAAAAAGPPGGGKPLTPAELEAQLVEKARKWHQLNSKRYGDKR 61
>01_06_0723 + 31501900-31502808,31502846-31503295
Length = 452
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 34 PGAGLSLNRSQHDAALPSTTPRQERKS-STDYSEP 135
PG L + DAA +TT +++R++ DYS P
Sbjct: 93 PGRALGFFHKEQDAAAVATTRKRKRRAIIVDYSTP 127
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 85 STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS-IDLRDPNGLRR 237
S +PR+ R YS R R+ RD+R ++++ S D R P G R
Sbjct: 143 SPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPR 194
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 26.6 bits (56), Expect = 8.5
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +1
Query: 10 ARAGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRS----RD 177
+R GS S G+S S + +PS + R +SST +P R+ RS R
Sbjct: 226 SRPGSSSSNVPGISRATSLSSSTVPSMS-RSSSRSSTPTRQPAMRSSAPAVGRSPSVGRS 284
Query: 178 ARVKKKTDSIDLRDPNGLR 234
+ + T SI+ NG R
Sbjct: 285 SSISSLTSSINRPAANGGR 303
>05_04_0017 + 17180991-17181074,17181657-17181759,17181794-17182014
Length = 135
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 427 VHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVE---PRESGGSKQC 278
+ +L + G AK + A + ++LA G + V PR+SGGS++C
Sbjct: 80 MESLWKVVGAAKHGGGPVAAMARQLPSALATLGAATVPVGASGPRDSGGSRRC 132
>04_03_1018 +
21753634-21753640,21754282-21754315,21754413-21754432,
21754485-21755782
Length = 452
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 421 ALGRAAGGAKLPSAGLCLNASKAEASLA 338
ALG A P G CLN K+EASLA
Sbjct: 206 ALGLMPSSAASPQLG-CLNVLKSEASLA 232
>03_05_0751 - 27389910-27392105
Length = 731
Score = 26.6 bits (56), Expect = 8.5
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 409 AAGGAKLPSAG--LCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTS 266
A G AK AG + LN SKAE + + ++ E SKQ F S
Sbjct: 246 AGGVAKRQEAGKAISLNVSKAEVLKVKKNRQSEDLDVMEGRNSKQSAFCS 295
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 26.6 bits (56), Expect = 8.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 13 RAGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEP-RHRTE-LYPDLRSRDARV 186
R+G ES + + S S +PR ++ S +D P RHR E L P R AR
Sbjct: 582 RSGRRESDRSRDHYSSSSRRNRSRSISPRHKKSSRSDSRSPKRHREESLSPSKSRRSARA 641
Query: 187 KKKT 198
++
Sbjct: 642 GSRS 645
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,332,235
Number of Sequences: 37544
Number of extensions: 293751
Number of successful extensions: 1013
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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