Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0556
         (429 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    33   0.31 
BC034604-1|AAH34604.1|  753|Homo sapiens striatin, calmodulin bi...    31   1.7  
BC004910-1|AAH04910.2|  349|Homo sapiens STRN4 protein protein.        31   1.7  
AF212940-1|AAF29527.1|  753|Homo sapiens zinedin protein.              31   1.7  
AB209003-1|BAD92240.1|  755|Homo sapiens Zinedin variant protein.      31   1.7  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   2.9  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   2.9  
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ...    30   3.8  
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ...    30   3.8  
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ...    30   3.8  
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ...    30   3.8  
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ...    30   3.8  
AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protei...    30   3.8  
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein...    30   3.8  
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot...    30   3.8  
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.                 30   3.8  
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.     30   3.8  
Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.          29   5.1  
BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB dom...    29   5.1  
AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB dom...    29   5.1  
AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB dom...    29   5.1  
L13744-1|AAA58361.1|  568|Homo sapiens AF-9 protein.                   29   6.7  
BX649194-1|CAE46213.1|  298|Homo sapiens hypothetical protein pr...    29   6.7  
AL512635-1|CAH70705.1|  568|Homo sapiens myeloid/lymphoid or mix...    29   6.7  
AL354879-1|CAI14771.1|  568|Homo sapiens myeloid/lymphoid or mix...    29   6.7  
AF091081-1|AAC72950.1|  303|Homo sapiens unknown protein.              29   6.7  

>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 23/58 (39%), Positives = 27/58 (46%)
 Frame = +1

Query: 1   PLPARAGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 174
           P P R     S GA  S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 200 PSPPRRPQHNSSGA--SPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>BC034604-1|AAH34604.1|  753|Homo sapiens striatin, calmodulin
           binding protein 4 protein.
          Length = 753

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -3

Query: 337 ESGKDMLTVEPRESGGSKQCDFTSRVSHQNARRDVEAHLDRGDR 206
           E G  +LT+E R S G  Q +    VSH N    + AH DRG R
Sbjct: 621 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 662


>BC004910-1|AAH04910.2|  349|Homo sapiens STRN4 protein protein.
          Length = 349

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -3

Query: 337 ESGKDMLTVEPRESGGSKQCDFTSRVSHQNARRDVEAHLDRGDR 206
           E G  +LT+E R S G  Q +    VSH N    + AH DRG R
Sbjct: 217 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 258


>AF212940-1|AAF29527.1|  753|Homo sapiens zinedin protein.
          Length = 753

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -3

Query: 337 ESGKDMLTVEPRESGGSKQCDFTSRVSHQNARRDVEAHLDRGDR 206
           E G  +LT+E R S G  Q +    VSH N    + AH DRG R
Sbjct: 621 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 662


>AB209003-1|BAD92240.1|  755|Homo sapiens Zinedin variant protein.
          Length = 755

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -3

Query: 337 ESGKDMLTVEPRESGGSKQCDFTSRVSHQNARRDVEAHLDRGDR 206
           E G  +LT+E R S G  Q +    VSH N    + AH DRG R
Sbjct: 623 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 664


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 366 TPLRPKPA*PNPARICSLWSPESRE 292
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 366 TPLRPKPA*PNPARICSLWSPESRE 292
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1566

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 609 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 668

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 669 TKTQEISRPN 678


>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1298

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 341 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 400

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 401 TKTQEISRPN 410


>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1566

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 609 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 668

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 669 TKTQEISRPN 678


>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1298

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 341 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 400

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 401 TKTQEISRPN 410


>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1566

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 609 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 668

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 669 TKTQEISRPN 678


>AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protein
           ARP protein.
          Length = 995

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 38  SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 97

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 98  TKTQEISRPN 107


>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
           protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 55  SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 114

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 115 TKTQEISRPN 124


>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
           protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 55  SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSLLKSNKRQREKVASDTEEADRTSSKK 114

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 115 TKTQEISRPN 124


>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
          Length = 1566

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 609 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 668

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 669 TKTQEISRPN 678


>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
          Length = 1552

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           +G +    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KK
Sbjct: 595 SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKK 654

Query: 196 TDSIDLRDPN 225
           T + ++  PN
Sbjct: 655 TKTQEISRPN 664


>Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 388 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 281
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 388 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 281
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 388 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 281
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 variant protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 388 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 281
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>L13744-1|AAA58361.1|  568|Homo sapiens AF-9 protein.
          Length = 568

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           + S  S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K 
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216

Query: 196 TDSIDLRDPNGLRRRVSR 249
                 RD N   +  S+
Sbjct: 217 AFKEPSRDHNKSSKESSK 234


>BX649194-1|CAE46213.1|  298|Homo sapiens hypothetical protein
           protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           + S  S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K 
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216

Query: 196 TDSIDLRDPNGLRRRVSR 249
                 RD N   +  S+
Sbjct: 217 AFKEPSRDHNKSSKESSK 234


>AL512635-1|CAH70705.1|  568|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 568

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           + S  S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K 
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216

Query: 196 TDSIDLRDPNGLRRRVSR 249
                 RD N   +  S+
Sbjct: 217 AFKEPSRDHNKSSKESSK 234


>AL354879-1|CAI14771.1|  568|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 568

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +1

Query: 16  AGSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKK 195
           + S  S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K 
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216

Query: 196 TDSIDLRDPNGLRRRVSR 249
                 RD N   +  S+
Sbjct: 217 AFKEPSRDHNKSSKESSK 234


>AF091081-1|AAC72950.1|  303|Homo sapiens unknown protein.
          Length = 303

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 422 CTRPSGRWCEAT-IRGIMPERL*GRSQPSRIRQGYAHCGAPRVGRL 288
           C+RP+GRW + T +    P+ L    +PSR    +  C   R  RL
Sbjct: 170 CSRPAGRWGDLTMLPSPRPQLLPALRRPSRACCAWPTCSPHRPHRL 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,163,702
Number of Sequences: 237096
Number of extensions: 1411181
Number of successful extensions: 4338
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4338
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)