Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0556
(429 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.36
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 2.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 2.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 2.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 2.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 2.5
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 3.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 7.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 7.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 7.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 7.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.7
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.0 bits (52), Expect = 0.36
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 49 SLNRSQHDAALPSTTPRQERKSST 120
++N+ Q + TTP++ERK++T
Sbjct: 776 NVNKEQSPNSTKETTPKKERKTAT 799
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 421 ALGRAAGGAKLPSAGLCLNASKAEASL 341
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 421 ALGRAAGGAKLPSAGLCLNASKAEASL 341
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 421 ALGRAAGGAKLPSAGLCLNASKAEASL 341
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 421 ALGRAAGGAKLPSAGLCLNASKAEASL 341
ALGR AGG S+ L L+ + +SL
Sbjct: 5 ALGRCAGGGGRLSSVLSLSLTSLASSL 31
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 2.5
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = -2
Query: 263 RFASKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVRCRGSE*SVDDFRSWRGVVL 84
+ A + R +PF + + S L RA RSG SV+ +E F G +
Sbjct: 500 KIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTE-----FGIPTGTLY 554
Query: 83 GRA-ASCCDLLRLSPAP 36
GR +L R +P P
Sbjct: 555 GRCKREGIELSRSNPTP 571
Score = 21.0 bits (42), Expect = 5.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 51 SQQIAARRCSTEHNTPPGT 107
S Q + +R STE P GT
Sbjct: 534 SGQTSVQRASTEFGIPTGT 552
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 3.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 50 VSTDRSTTLLYRAQHPARNGSRLQTIPSP 136
VS DR++ + YR +PA +Q+ PSP
Sbjct: 416 VSPDRTSPMEYRLYNPA----LIQSQPSP 440
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.6 bits (41), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 118 TDYSEPRHRTELYPDLRSRDARVKKKTDSIDL 213
T SE + L+P L SRD ++ ++++L
Sbjct: 407 TSASELVESSVLFPSLDSRDELHPRELEAVNL 438
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 7.7
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 94 PRQERKSSTDYSEPRHRTELYPD 162
PR+ R+ T+Y E R++ + + +
Sbjct: 405 PREMRQRITEYFEHRYQGKFFDE 427
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.7
Identities = 14/66 (21%), Positives = 25/66 (37%)
Frame = +1
Query: 52 LNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGL 231
LN + + P PR++ +++ P +R + S+DL GL
Sbjct: 327 LNFQEERRSEPVEPPRRKNNCPLHCKPELGQSQSSPKFVARREESNSSSPSLDLGKEGGL 386
Query: 232 RRRVSR 249
+ SR
Sbjct: 387 EAQWSR 392
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 7.7
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 94 PRQERKSSTDYSEPRHRTELYPD 162
PR+ R+ T+Y E R++ + + +
Sbjct: 373 PREMRQRITEYFEHRYQGKFFDE 395
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 7.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 101 RNGSRLQTIPSPDIEL 148
RNG+ L+T+ P+I +
Sbjct: 346 RNGADLETLNEPEIRV 361
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 7.7
Identities = 9/39 (23%), Positives = 18/39 (46%)
Frame = +1
Query: 94 PRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 210
P+Q+++ + + + YPDL + A K + D
Sbjct: 1450 PQQQQQQQQQQQQQQQQLNHYPDLHNLYAVPTDKKSACD 1488
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,013
Number of Sequences: 438
Number of extensions: 2490
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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